Gene Bcep18194_C6935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6935 
Symbol 
ID3734318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp491132 
End bp492034 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID637760638 
ProductABC sugar transporter, inner membrane subunit 
Protein accessionYP_366625 
Protein GI78060050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.111402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.938789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCA TCCGTCAACG CTTTCATGCG GACCAGCCGT CCACCGGCAC GTCGGGCGGC 
GGGCTGCGCA CGAGTGCGCT GCTGCGCCGC GTGCCGGGGT TCGCGCGGCT CGTCGCCGCG
ATCGCGATCG TCGCGATCGT GCTGCTGCCG ACGATCTACA TGGTGCTGAT GTCGCTGCGC
ACCGGCGACG ACATCATCGC GCGCCCGCTG GGGCTGCCCG ACCATGTGTT CTTCGGCAAC
TACGCGGCCG TGTTCACGCA GATGAACTAC TGGCGCAGCG TCGCGAACAC GATCGGCATC
ACGCTCGCGG TCACGTTTCT CGTCGCGCTG CTGTCGTCGC TCGCGGCCTA TCCGCTGGCC
CGCGTGAAGG GCCGGCTGTC GAACGCGGTC TACATCGTGC TGACGCTCGG CCTGACGATC
CCGATGTTCG TCAGCCTCAC GCCGCTGTAT GTGCTGTTCC GCGACCTGCA CCTGCTCAAC
ACGTATCTCG GCGTCGTGCT CGCGTACACC GTGCAGAGCC TGCCTCTCGG CGTGTTCTTC
TACACGAGCT TCCTGAAGCG GATTCCGCTC GAACTCGAGG AAGCCGCGGT GATGGACGGC
TGCAGCCCGC TGCAGGTGTA CTGGTACATC GTGCTGCCGC TGTTGCGGCC GATCACCGGC
ACGCTCGCGA TGTTCGTCAC GCTGTCGGTG TGGAACGACC TCGTCTATCC GCTGCTGTTC
CTGACCGACT CGTCGAAGTT CACGATCACG GTCGCGGTGT TCCGCTTCAT CGGCACCAAC
GACATCGACC CGACCAAGCT GTTCCCTGCA GCCGTGATGG GCACGCTGCC GCTGCTCGTG
CTGTTCTTCA TTCTCCAGCG CAAGATCGTC GCGGGTATCA CGGCCGGCGC GGTCAAGGGG
TAA
 
Protein sequence
MNVIRQRFHA DQPSTGTSGG GLRTSALLRR VPGFARLVAA IAIVAIVLLP TIYMVLMSLR 
TGDDIIARPL GLPDHVFFGN YAAVFTQMNY WRSVANTIGI TLAVTFLVAL LSSLAAYPLA
RVKGRLSNAV YIVLTLGLTI PMFVSLTPLY VLFRDLHLLN TYLGVVLAYT VQSLPLGVFF
YTSFLKRIPL ELEEAAVMDG CSPLQVYWYI VLPLLRPITG TLAMFVTLSV WNDLVYPLLF
LTDSSKFTIT VAVFRFIGTN DIDPTKLFPA AVMGTLPLLV LFFILQRKIV AGITAGAVKG