Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00882 |
Symbol | araQ |
ID | 6305956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2486734 |
End bp | 2487570 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642639720 |
Product | L-arabinose transport system permease protein AraQ |
Protein accession | YP_001913580 |
Protein GI | 188576651 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0407955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTG ATGTTGGCCA ATCGCGCTGG AATGCCGTGC TTATCAACGG CGGCCTGCTG GTGCTGGCGG TGATCAGCCT GGCGCCGTTG CTGTGGATGC TGTCGGTGTC GTTCATGCCC ACCGGCGAGG CCAGCCGGTT TCCGCCACCG ATGCTGCCAT CGGCATTCAC TCTGGCCAAC TACCACGAGC TGTTTGCACG CACCGGCATG GCGCGCAACT TCGCCAACAG CCTGTTGGTC TCCGGGCTGA TCACGCTCGG GTCGTTGCTG GTCAACACCA TGGCCGGTTA TGCGTTCGCC AAGCTGCAGT TCGTCGGCCG CGAGCGCATC TTCAAGATCC TGATGGCGGC ATTGGTGATT CCGGCGCAGG TGGCGATGCT GCCGCTGTTC CTGCTGATGA AGCAGTTGCA CCTGGTCAAC AACATCGGCG GGGTGGTTGT GCCGGCGTTG GCCACGGTGT TCGGCATCTT CCTGGTGCGT CAGTACGCGC GCAGCATTCC CGATGAATTG ATCGAAGCCG CGCGTGTCGA TGGCGCCAGC GAGATGCGGA TCTTTTTCCA GATCGTGTTG CCGATGCTCA AGCCGGTGCT GGTGACCTTG ACCATCTTCA CCTTCATGGG CTCGTGGAAC GATTTCATGT GGCCGCTGAT CGTGCTGACC GACCAGGAGC AATACACCTT GCCGGTGGCG CTGGCGGCGC TGTCGCGCGA GCACATCATG GACGTGGAAT TGATGATGGC CGGTGCCGTG GTGACGGTGA TTCCGGTGCT GCTATTGTTC CTGGCGCTGC AGCGTTACTA CATCCAAGGT CTTCTGCTGG GGAGTGTGAA GGGGTGA
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Protein sequence | MSRDVGQSRW NAVLINGGLL VLAVISLAPL LWMLSVSFMP TGEASRFPPP MLPSAFTLAN YHELFARTGM ARNFANSLLV SGLITLGSLL VNTMAGYAFA KLQFVGRERI FKILMAALVI PAQVAMLPLF LLMKQLHLVN NIGGVVVPAL ATVFGIFLVR QYARSIPDEL IEAARVDGAS EMRIFFQIVL PMLKPVLVTL TIFTFMGSWN DFMWPLIVLT DQEQYTLPVA LAALSREHIM DVELMMAGAV VTVIPVLLLF LALQRYYIQG LLLGSVKG
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