Gene Bcav_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0320 
Symbol 
ID7859012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp344993 
End bp345895 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID643864396 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002880346 
Protein GI229818820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CGACGCTCTC CCCCGCCGCC GCGCCCGCCG TCGTCGGCAC GGCTCGCACG 
GGCCGCTCCG CGAAGCAGCG CCGCGCCCGG CGCACGCGCT GGATCTGGGC AGCGGCTCTG
TGGATCCTCG CGATCGCGTT CCTCGCGCCG TTCGCGTGGA TGCTCTCGAC GTCGCTGAAG
ACGAACGCGG ACGCGTTCAC GATCCCGATG GAGTGGATCC CGGACCCGCT GCGGTGGGAC
TCGTTCGTCG CGGTGCTCAC CGGCCCGACG TCGATCGTGC CGGCCTTCGC GAACTCCGTG
ATCGTGGCGA CCGCCCGCGT GCTCGGCGAG GTGCTGACGG CGACGATGGC CGGCTACGCG
TTCGCCCGCC TGCACTTCCG CGGACGCGAC AAGATCTTCC TGGCCTACCT GGCGACGTCG
ATCATCCCCG CCCAGCTCCT GCTCGTGCCC CGGTTCATCT ACTTCCAGCA GATGGGGCTG
TACGACACGC TGTGGGCGCT CATCCTGCCC GGCATGTTCA CGGTGCTCGG CACGTTCCTC
ATGCGGCAGT TCTTCGTGGC GCAGCCGTCG GCGTTCGCGG AGGCCGCCCG GATCGACGGT
GCGAACGAGT GGCAGATCTT CTGGCGGCTC TACCTGCCGA TGGCGACGCC CGTCATGAGC
GCACTCGGGA TCCTCGCGTT CGTGTGGTCG TGGAACGACT ACGAGACGCC GCTCGTGCTC
ATCTCGAGCC CCGAGGCGTT CACGCTCCCG CTGAGCCTGA CGAACTTCAC CGACGAGCAG
GGCTCGCTCG CACCCAACCT GTCGATGGCG GCGTCGGTCG TCTCGATCAT CCCCGTGCTC
ATCGTGTTCC TGCTGCTGCA GAAGCGCTTC GTGCACGCCA TGACCCACAC CGGCATCAAG
TGA
 
Protein sequence
MTDATLSPAA APAVVGTART GRSAKQRRAR RTRWIWAAAL WILAIAFLAP FAWMLSTSLK 
TNADAFTIPM EWIPDPLRWD SFVAVLTGPT SIVPAFANSV IVATARVLGE VLTATMAGYA
FARLHFRGRD KIFLAYLATS IIPAQLLLVP RFIYFQQMGL YDTLWALILP GMFTVLGTFL
MRQFFVAQPS AFAEAARIDG ANEWQIFWRL YLPMATPVMS ALGILAFVWS WNDYETPLVL
ISSPEAFTLP LSLTNFTDEQ GSLAPNLSMA ASVVSIIPVL IVFLLLQKRF VHAMTHTGIK