Gene Ndas_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0754 
Symbol 
ID9244596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp924573 
End bp925442 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003678705 
Protein GI297559731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.467109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCC CCACCGCCCC CGCCGCGCGG CGCGTCCACC GGCCCCGGCG CGCGCCCTCC 
CCCGGGACGA TCGCCCTCTA CACGGTCTCC GCCCTGGCCG GAGCCCTCTG GCTCGTCCCC
CTCCTGTGGG CCTTCGCCAC CTCGGTCAAA CCCGAGGGCG AGACCACCGT CATGCCGCCC
TCCTGGCTCA CCGACAACGC CACCTTCGAG GCGTACGCCC TCGTGCTGGG GCGCGGGGAC
ATCCTGCGCT GGACGGCGAA CTCCCTCATC ACCACGGCCA TCGTCACCGC CCTCACCCTG
GTGGTCTGCG TCCTGGCCGC CTACGGGTTC TCCCGCTTCG ACTTCCGCGG CAGGCCGTGG
CTGTTCACGC TCGTCATCGG CGGCATCCTC ATCCCGCCTC AGACCCTGAT CGTGCCGCAG
TTCGTCCTGA TGACCCAGCT CGGACTGGTG GACACCTACT GGGGTGTCGC GCTGCCGCAG
GTGGTCGCGC CGGTGTTCGT GTTCATCCTC AAACGCTTCT TCGACGCCAT CCCCCGCGAG
TACGAGGACG CCGCCAGGAT GGACGGCGCC GGAGCGCCGC GCGTCCTGTG GAACGTGATC
CTGCCGCTGT CGAGGCCGGT CCTGGCCGCG GTCGGCATCT TCGCCTTCAT CGGCGCCTGG
AACAACTTCC TGTGGCCCTT CCTGGTCACG AACGACCCCG AGATGATGAC GCTCACCGTC
GGGCTGGGCA CCGTGGCCGG ACAGTACGGG GTCCAGTACG CCCAGGTCAT GGCCTCGGCC
GTGCTGGGAG CGGTCCCGCT GCTGGTCGTC TTCCTGCTCT TCCAGCGCCA CATCGTCACC
GGTGTGGCCG GAGCGGGCAT CAAGGGCTGA
 
Protein sequence
MAAPTAPAAR RVHRPRRAPS PGTIALYTVS ALAGALWLVP LLWAFATSVK PEGETTVMPP 
SWLTDNATFE AYALVLGRGD ILRWTANSLI TTAIVTALTL VVCVLAAYGF SRFDFRGRPW
LFTLVIGGIL IPPQTLIVPQ FVLMTQLGLV DTYWGVALPQ VVAPVFVFIL KRFFDAIPRE
YEDAARMDGA GAPRVLWNVI LPLSRPVLAA VGIFAFIGAW NNFLWPFLVT NDPEMMTLTV
GLGTVAGQYG VQYAQVMASA VLGAVPLLVV FLLFQRHIVT GVAGAGIKG