| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23000 |
|---|
| Symbol | |
|---|
| ID | 4381181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1994594 |
|---|
| End bp | 1995439 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639324407 |
|---|
| Product | putative permease of ABC sugar transporter |
|---|
| Protein accession | YP_789992 |
|---|
| Protein GI | 116051177 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.109316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACA CGTCCCTGAA CCCGAGCTTC AGCGTCAGCC GCCTGGCCGT GCACCTGACC
CTCTGGGGCG CCTGCGCGCT TTACCTGGTG CCGCTGCTGG TGATGCTGCT GACCAGCTTC
AAGACGCCGG ACGACATCCG CACCGGCAAC CTGCTGTCGC TGCCCGACAC CTTCACCGTC
ATCGGCTGGC TCAAGGCCTG GGACAGCGTC GGCGCGTTCT TCTGGAACTC GGTGCTGATC
ACCGTGCCCG GCGTGCTGAT CTCCACCTTC ATCGGCGCGT TGAACGGCTA CGTGCTGTCG
ATGTGGCGCT TCCGCGGTTC CCAGCTGTTC TTCGGCGCGC TGTTGTTCGG CTGCTTTCTA
CCGTTCCAGG TGATCCTCCT GCCGATGTCC TTCACCCTCG GCAAGCTCGG CCTGGCCAAT
ACCACCAGTG GCCTGGTGCT GGTCCACGTG ATCTACGGCC TGGCCTTCAC CACGCTGTTC
TTCCGCAACT ATTTCGTGGC GATCCCGGAT GCCCTGGTCA AGGCCGCGCG CCTGGACGGC
GCCGGTTTCT TCACCATCTT CCTGCGCATC CTGCTGCCGA TGTCCACGCC CATCGTGATG
GTCTGCCTGA TCTGGCAGTT CACCCAGATC TGGAACGACT TCCTGTTCGG CGTGGTGTTC
GCCAGCGGCG ATTCGCAACC GATCACCGTG GCCCTGAACA ACCTGGTGAA CATCACCACC
GGGGTCAAGG AATACAACGT CGACATGGCC GCGGCGATGA TCGCCGCGCT GCCCACGCTG
GTGGTCTACG TACTGGCCGG CAAGTACTTC GTGCGCGGCC TCACCGCCGG CGCCGTGAAA
GGCTGA
|
|---|
| Protein sequence | MRDTSLNPSF SVSRLAVHLT LWGACALYLV PLLVMLLTSF KTPDDIRTGN LLSLPDTFTV
IGWLKAWDSV GAFFWNSVLI TVPGVLISTF IGALNGYVLS MWRFRGSQLF FGALLFGCFL
PFQVILLPMS FTLGKLGLAN TTSGLVLVHV IYGLAFTTLF FRNYFVAIPD ALVKAARLDG
AGFFTIFLRI LLPMSTPIVM VCLIWQFTQI WNDFLFGVVF ASGDSQPITV ALNNLVNITT
GVKEYNVDMA AAMIAALPTL VVYVLAGKYF VRGLTAGAVK G
|
|---|
| |