| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1693 |
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| Symbol | |
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| ID | 6163201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1807389 |
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| End bp | 1808237 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641664453 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001790725 |
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| Protein GI | 171058376 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.262345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT TCCATCGTTT CGTCCTGTTC GGCCTGCTGG CCGTGTTCGC GGCGTTTTTC
CTGCTGCCCT TCTACGTGAT GCTGGTCACC TCACTGAAGG ACATGAACGA GATCCGCAAC
GGCAGCCTGC TGGCACTGCC GCAGGCACTC GACTTCACCT CGTGGTTCAA GGCCTGGGGC
AGCGCCTGCA CCGGCATGGA CTGCAGCGGG CTCAAGCCGT ATTTCTTCAA CTCGCTGATC
ATGATCGTGC CGGCCGTGGC GATCTCGACC ACGCTGGGCG CGCTCAACGG CTACGTGCTG
ACCAAGTGGC GCTTCAAGGG CAGCGAACTG CTGTTCTCGC TGATGCTGTT CGGCGTCTTC
ATGCCGCTGC AGGTGGTGCT GCTGCCGATG TCGCAGGTGC TGGGCTGGGT GGGGCTGTCG
GACTCGGTCT GGGGCCTGGT CTGCGTGCAC GTGCTGATGG GGCTGGCGTC GACCACGCTG
TTCTTCCGCA ACTACTACAT CGGCCTGCCT GACGAACTGA TCAAGGCGGC GATGCTCGAC
GGCGCGGGCT TCTTCCGGAT CTTCTGGCGC ATCGTGCTGC CGCTGTCGAC GCCGATCCTG
GTGGTGACGG TGATCTGGCA GTTCACCAAC ATCTGGAACG ACTTCCTGTT CGGCGTGGTG
TTCTCCGGCG CCGACTCCAA GCCCATCACG GTGGGTCTGA ACAATCTGGC CAACACGTCG
AGTTCCGTCA AGGAATACAA CGTCGACATG GCCGCTGCAT TGATTGCCGC ACTGCCGACG
CTCGCCGTCT ACGTGCTGGC TGGCAAATAC TTTGTGCGCG GCCTGACGGC CGGCGCGGTG
AAAGGCTGA
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| Protein sequence | MKTFHRFVLF GLLAVFAAFF LLPFYVMLVT SLKDMNEIRN GSLLALPQAL DFTSWFKAWG
SACTGMDCSG LKPYFFNSLI MIVPAVAIST TLGALNGYVL TKWRFKGSEL LFSLMLFGVF
MPLQVVLLPM SQVLGWVGLS DSVWGLVCVH VLMGLASTTL FFRNYYIGLP DELIKAAMLD
GAGFFRIFWR IVLPLSTPIL VVTVIWQFTN IWNDFLFGVV FSGADSKPIT VGLNNLANTS
SSVKEYNVDM AAALIAALPT LAVYVLAGKY FVRGLTAGAV KG
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