| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3933 |
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| Symbol | |
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| ID | 3936414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4030685 |
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| End bp | 4031566 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637906311 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511875 |
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| Protein GI | 89056424 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.464389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAG CCTCGTCTGA CACCGCCATC CGCTCGTCGA ACTGGACCCG GACGCTGATT
TATCTGGTCC TGCTGCTGTT CGCGCTGTTC TATCTGCTGC CGCTGTTCAT CATGGTGGTG
AACTCTCTGA AACCGCTGTC GGAAATCACC GAAGGCGGCA TGATCGCGCT GCCCAACGAA
TGGACGATCC AGCCCTGGCT GTCTGCCTGG TCCACTGCCC AGATCGGGGT GGAGCCGACG
GGCCTGCGCC CCTATTTCAT CAACTCCATC GCCATGGCGG TGCCTGCGGT CGCTATCTCG
ACCATTGCGG GGGCTTTGAA TGGCTACGTC CTGACGAAAT GGCACTTCCG GGGTGCGACC
TGGATCTTCG GCCTGCTGTT GTTCTCCTGC TTCATTCCGT TCCAGATCGT CCTGATCCCG
ATGGCGCGGA TCCTGGGGAT CCTGAATATC TCGGGCACCA CCTACGGGCT GATCCTGGTC
CACGTGGTCT ACGGTATCGG GTTTTCCACG CTCTATTTCC GCAACTACTA TGCGGCCTTC
CCGACAGAGC TGGTGCGCGC CGCCCAGATC GACGGCGCGG GGTTCTTCCA GATCTTCTGG
CGGATCATGT TGCCGTCGTC GGGGCCGATC ATCGCGGTCT GCTGCATCTG GCAGTTCACC
AACATCTGGA ATGACTTCCT GTTCGGCGCG TCGTTTGCGT CCGGGGATGC CGCGCCGATG
ACCGTGGCGC TGAACAATCT GGTGAATTCA TCGACGGGTG AACGCCCCTA CAACGTCCAT
TTCGCCGGGG CGATCATGGC CGCCGGCCCC ACACTTCTCG TCTACATCGT GGCTGGTCGA
TACTTCGTCC GTGGCCTGAT GGCAGGCAGC GTAAAAGGAT GA
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| Protein sequence | MAIASSDTAI RSSNWTRTLI YLVLLLFALF YLLPLFIMVV NSLKPLSEIT EGGMIALPNE
WTIQPWLSAW STAQIGVEPT GLRPYFINSI AMAVPAVAIS TIAGALNGYV LTKWHFRGAT
WIFGLLLFSC FIPFQIVLIP MARILGILNI SGTTYGLILV HVVYGIGFST LYFRNYYAAF
PTELVRAAQI DGAGFFQIFW RIMLPSSGPI IAVCCIWQFT NIWNDFLFGA SFASGDAAPM
TVALNNLVNS STGERPYNVH FAGAIMAAGP TLLVYIVAGR YFVRGLMAGS VKG
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