More than 300 homologs were found in PanDaTox collection
for query gene BBta_7793 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_7793  putative multiple antibiotic resistance (MarC)-related protein  100 
 
 
202 aa  392  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  41.03 
 
 
208 aa  111  7.000000000000001e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_013889  TK90_2079  multiple antibiotic resistance (MarC)-related protein  34.83 
 
 
209 aa  111  9e-24  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00616176  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  38.46 
 
 
205 aa  110  1.0000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  35.78 
 
 
206 aa  107  2e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  37.5 
 
 
207 aa  107  2e-22  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  37.31 
 
 
207 aa  105  6e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  35.15 
 
 
210 aa  105  6e-22  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_007406  Nwi_1802  multiple antibiotic resistance (MarC)-related proteins  35.35 
 
 
207 aa  103  2e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0240208  normal  0.177395 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  40.5 
 
 
205 aa  102  3e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1763  multiple antibiotic resistance (MarC)-related proteins  36.18 
 
 
207 aa  101  7e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.619286  n/a   
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  37.82 
 
 
203 aa  100  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  37.63 
 
 
206 aa  99.8  2e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  37.63 
 
 
206 aa  99.8  2e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  34.47 
 
 
215 aa  95.1  7e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  36.36 
 
 
209 aa  94  1e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1399  multiple antibiotic resistance (MarC)-related proteins  33.17 
 
 
217 aa  94  1e-18  Chelativorans sp. BNC1  Bacteria  normal  0.557326  n/a   
 
 
-
 
NC_008340  Mlg_1366  multiple antibiotic resistance (MarC)-related proteins  36.14 
 
 
209 aa  94.4  1e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0943979  normal 
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  32.21 
 
 
212 aa  94  1e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  34.69 
 
 
212 aa  93.6  2e-18  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  31.07 
 
 
209 aa  92.4  4e-18  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  30.77 
 
 
209 aa  92  5e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  33.67 
 
 
214 aa  91.7  6e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0374  multiple antibiotic resistance (MarC)-related proteins  31.71 
 
 
214 aa  92  6e-18  Maricaulis maris MCS10  Bacteria  normal  normal  0.774303 
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  29.06 
 
 
235 aa  91.3  9e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  36.5 
 
 
204 aa  91.3  9e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_004310  BR1098  hypothetical protein  30.77 
 
 
209 aa  90.9  1e-17  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1553  multiple antibiotic resistance (MarC)-related proteins  35.08 
 
 
210 aa  90.9  1e-17  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.460198 
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  31.16 
 
 
202 aa  89.4  3e-17  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  26.83 
 
 
207 aa  88.2  8e-17  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  33.96 
 
 
215 aa  87  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_011145  AnaeK_2709  multiple antibiotic resistance (MarC)-related protein  33.02 
 
 
217 aa  86.3  3e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2623  multiple antibiotic resistance (MarC)-related proteins  34.3 
 
 
217 aa  85.9  3e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2804  multiple antibiotic resistance (MarC)-related protein  33.5 
 
 
217 aa  86.3  3e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0569832  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  29.7 
 
 
211 aa  85.5  5e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  29.7 
 
 
211 aa  85.1  6e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_009436  Ent638_2303  hypothetical protein  29.7 
 
 
215 aa  85.1  6e-16  Enterobacter sp. 638  Bacteria  normal  0.45168  normal 
 
 
-
 
NC_008709  Ping_1391  multiple antibiotic resistance (MarC)-related proteins  34.59 
 
 
198 aa  85.1  6e-16  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  32.04 
 
 
209 aa  85.1  7e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  32.04 
 
 
209 aa  84.7  8e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2011  multiple antibiotic resistance (MarC)-related protein  28.17 
 
 
226 aa  84.3  0.000000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  27.8 
 
 
242 aa  84.3  0.000000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2825  integral membrane protein, MarC family  27.45 
 
 
207 aa  84  0.000000000000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2036  multiple antibiotic resistance (MarC)-related protein  28.17 
 
 
226 aa  84.3  0.000000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.0819991  normal 
 
 
-
 
NC_014230  CA2559_08146  multiple antibiotic resistance protein MarC  31.34 
 
 
204 aa  83.6  0.000000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1962  hypothetical protein  31.68 
 
 
214 aa  82.8  0.000000000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2587  multiple antibiotic resistance (MarC)-related protein  30.58 
 
 
229 aa  82.8  0.000000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.9732  normal  0.188603 
 
 
-
 
NC_010465  YPK_2071  hypothetical protein  31.68 
 
 
214 aa  82.8  0.000000000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0381177  n/a   
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  31.9 
 
 
210 aa  82  0.000000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  30.77 
 
 
209 aa  81.6  0.000000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_010159  YpAngola_A2164  hypothetical protein  30.2 
 
 
214 aa  82  0.000000000000006  Yersinia pestis Angola  Bacteria  normal  0.033055  normal  0.026113 
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  31 
 
 
204 aa  81.6  0.000000000000007  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009901  Spea_2045  hypothetical protein  32.35 
 
 
207 aa  81.3  0.000000000000009  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00255531  n/a   
 
 
-
 
NC_011083  SeHA_C1938  hypothetical protein  29.65 
 
 
215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.476555 
 
 
-
 
NC_011205  SeD_A1580  hypothetical protein  29.65 
 
 
215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.439502  normal 
 
 
-
 
NC_011094  SeSA_A1881  hypothetical protein  29.65 
 
 
215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.66407 
 
 
-
 
NC_011080  SNSL254_A1875  hypothetical protein  29.65 
 
 
215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.67019  normal 
 
 
-
 
NC_011149  SeAg_B1397  hypothetical protein  29.65 
 
 
215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.126468  n/a   
 
 
-
 
NC_009832  Spro_2703  hypothetical protein  30.24 
 
 
214 aa  80.9  0.00000000000001  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000872945  hitchhiker  0.000692167 
 
 
-
 
CP001509  ECD_01216  predicted inner membrane protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2408  multiple antibiotic resistance (MarC)-related protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli DH1  Bacteria  hitchhiker  0.0000022238  n/a   
 
 
-
 
NC_010468  EcolC_2386  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.377039  hitchhiker  0.00000152892 
 
 
-
 
NC_010506  Swoo_2242  hypothetical protein  30.73 
 
 
212 aa  80.5  0.00000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.177472  normal  0.0116098 
 
 
-
 
NC_009800  EcHS_A1351  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli HS  Bacteria  hitchhiker  0.000939425  n/a   
 
 
-
 
NC_009801  EcE24377A_1390  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli E24377A  Bacteria  normal  0.718233  n/a   
 
 
-
 
NC_008048  Sala_3099  multiple antibiotic resistance (MarC)-related proteins  36.95 
 
 
209 aa  79.7  0.00000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.554479  normal 
 
 
-
 
NC_011353  ECH74115_1726  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.345038  normal  0.523448 
 
 
-
 
NC_012892  B21_01226  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1900  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.382554  normal  0.103806 
 
 
-
 
NC_009637  MmarC7_1270  multiple antibiotic resistance (MarC)-related protein  26.7 
 
 
213 aa  80.1  0.00000000000002  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1407  hypothetical protein  30.15 
 
 
215 aa  80.1  0.00000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  0.090251  n/a   
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  30.2 
 
 
231 aa  79.3  0.00000000000003  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008700  Sama_1694  hypothetical protein  32.34 
 
 
210 aa  79.7  0.00000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0657108 
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  29 
 
 
217 aa  79.3  0.00000000000004  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  25.73 
 
 
213 aa  79.3  0.00000000000004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  28.71 
 
 
216 aa  79  0.00000000000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_008009  Acid345_0603  multiple antibiotic resistance MarC-related protein  27.5 
 
 
216 aa  79  0.00000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  31.16 
 
 
214 aa  79.3  0.00000000000004  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  29.65 
 
 
220 aa  79  0.00000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1602  multiple antibiotic resistance (MarC)-related proteins  31.22 
 
 
248 aa  78.2  0.00000000000007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0931799  normal 
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  30.69 
 
 
211 aa  78.2  0.00000000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  25.98 
 
 
208 aa  77.8  0.0000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  29.86 
 
 
214 aa  77.8  0.0000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  28.91 
 
 
218 aa  77.4  0.0000000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  26.21 
 
 
213 aa  77  0.0000000000002  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009831  Ssed_2348  hypothetical protein  32.51 
 
 
210 aa  76.6  0.0000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0647314  hitchhiker  0.000000838099 
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  29.47 
 
 
212 aa  76.6  0.0000000000002  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  30.81 
 
 
219 aa  76.6  0.0000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_009380  Strop_0736  multiple antibiotic resistance (MarC)-related protein  31.75 
 
 
204 aa  76.6  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.588775  normal  0.31372 
 
 
-
 
NC_008578  Acel_1795  multiple antibiotic resistance (MarC)-related proteins  32.65 
 
 
203 aa  76.6  0.0000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.729209 
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  29.21 
 
 
211 aa  76.3  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002930  multiple antibiotic transporter  28.71 
 
 
212 aa  75.9  0.0000000000004  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000449619  n/a   
 
 
-
 
NC_009783  VIBHAR_03019  hypothetical protein  28.85 
 
 
212 aa  75.9  0.0000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  25.96 
 
 
213 aa  75.5  0.0000000000005  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_009092  Shew_1911  hypothetical protein  30.35 
 
 
213 aa  75.5  0.0000000000006  Shewanella loihica PV-4  Bacteria  normal  0.0139262  unclonable  0.00000197593 
 
 
-
 
NC_012669  Bcav_2908  multiple antibiotic resistance (MarC)-related protein protein  28.21 
 
 
206 aa  74.7  0.0000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.275757  normal  0.0232741 
 
 
-
 
NC_007355  Mbar_A3711  multiple antibiotic resistance protein  28.43 
 
 
212 aa  74.3  0.000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.372343  normal 
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  24.76 
 
 
212 aa  74.3  0.000000000001  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013131  Caci_8100  multiple antibiotic resistance (MarC)-related protein  26.8 
 
 
203 aa  73.6  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0682  multiple antibiotic resistance (MarC)-related protein  32.8 
 
 
204 aa  73.2  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.7403  normal  0.74996 
 
 
-
 
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