Gene Sala_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3099 
Symbol 
ID4082835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3248095 
End bp3248724 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID638011485 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_618136 
Protein GI103488575 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.554479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC TGTTCATCTC GGCCTTCGTC ACGCTGTTCG TCGTCATCGA CCCGCCGGGC 
TGCGCGCCGA TCTATGCCAG CCTGACCACC GGCGCGAGCG CGGCGCAGCG CCGGTCGATG
GCGATCCGCG CCACCCTGAT CGCGGGCGGC ATCCTGATCT TTTTCGCGAT GTTCGGCGAA
GCGCTGCTCG GCTTCCTGCA CATCGACCTC GACAGTTTCC GTATTGCGGG CGGGATCATG
CTGTTCATCA TCGCGATCGA CATGGTGTTT GAAAAACGCA CCGAACGCCG CGAACAGCGC
GCCGAGAAGA TCAAGGCGAC GCCGGAGGTC GAGGATGTTT CGGTGTTTCC GATGGCGATG
CCGATGCTCG CCGGGCCGGG GTCGATCGCT TCGGTGATGC TGCTCGTGTC ACAGAACAAC
GGGATCGAAC GCGCCTTCGT GATCTTTGGC GCGCTGCTGC TTGTCCTCCT CCTGACGCTT
GCGGCCCTGC TCGCGGCGGG GCCGCTGATG CGGCTGATCG GCCACAAGGG CGAGGCGGTG
ATCACGCGGC TGCTCGGCGT TCTGCTCGCC GCCCTTGCGG CGCAGTTCGT GATCGACGGG
CTGAAGGCGA GTTTTCCGAC GCTGACGTGA
 
Protein sequence
MIDLFISAFV TLFVVIDPPG CAPIYASLTT GASAAQRRSM AIRATLIAGG ILIFFAMFGE 
ALLGFLHIDL DSFRIAGGIM LFIIAIDMVF EKRTERREQR AEKIKATPEV EDVSVFPMAM
PMLAGPGSIA SVMLLVSQNN GIERAFVIFG ALLLVLLLTL AALLAAGPLM RLIGHKGEAV
ITRLLGVLLA ALAAQFVIDG LKASFPTLT