Gene Strop_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0736 
Symbol 
ID5057177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp818570 
End bp819184 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID640473003 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001157591 
Protein GI145593294 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.588775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.31372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATCA AGCTCTTCGG CGAGGTCTTT GTAACCCTGC TCGTGATTGT TGACCCGCCG 
GGCATGATGC CCATCTTTCT GGCGCTGACC GGACCGCTGT CGGCCCGGGA CCGGCACCGG
GCGGCCTGGC AGGCAGTGGC GCTGGCGCTC GGGGTGATCG CGATCTTCGC GGTGGCGGGC
TCGACCCTGC TCGACTACCT GCACGTGGAC CTGCCCGCGT TGCAGGCCGC CGGTGGCCTG
CTGCTCGTGC TGGTCGCCCT GGAACTGTTG ACCGGCAAAG CGGACGACCC CAGCCAGCAG
GCCACCTCGA ACATCGCACT GGTGCCGCTG GGCACCCCGT TGCTCGCCGG TCCCGGCGCG
ATCGTGGCCA CGATGCTCTT CATGCAGCAG GCCGACGGCG CGGCCGACAT AACCGCGATC
GCCGGCGCGA TCATCGCCGT GTTGCTCGCC GTCTGGGTGG TACTCCGCTT CTCCGGTGGG
ATCGTCAAGA TTCTGCGTCC GGGTGGCATC GAGGTGCTGA CCCGGATCGC TGGACTGTTG
CTGGCGGCCA TCGCGGTTCA GCTGATCGCC GACGCGGTGG CCGCCTTCGT CACCCAGTAC
ACGACCGCGA GCTGA
 
Protein sequence
MDIKLFGEVF VTLLVIVDPP GMMPIFLALT GPLSARDRHR AAWQAVALAL GVIAIFAVAG 
STLLDYLHVD LPALQAAGGL LLVLVALELL TGKADDPSQQ ATSNIALVPL GTPLLAGPGA
IVATMLFMQQ ADGAADITAI AGAIIAVLLA VWVVLRFSGG IVKILRPGGI EVLTRIAGLL
LAAIAVQLIA DAVAAFVTQY TTAS