More than 300 homologs were found in PanDaTox collection
for query gene TK90_2079 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_2079  multiple antibiotic resistance (MarC)-related protein  100 
 
 
209 aa  396  1e-109  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00616176  normal 
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  57.89 
 
 
210 aa  231  4.0000000000000004e-60  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_008340  Mlg_1366  multiple antibiotic resistance (MarC)-related proteins  67.46 
 
 
209 aa  224  6e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0943979  normal 
 
 
-
 
NC_008709  Ping_1553  multiple antibiotic resistance (MarC)-related proteins  59.62 
 
 
210 aa  206  2e-52  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.460198 
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  46.45 
 
 
207 aa  157  1e-37  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  45 
 
 
205 aa  149  2e-35  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  44.5 
 
 
209 aa  147  1.0000000000000001e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  44.08 
 
 
206 aa  145  3e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  44.08 
 
 
206 aa  145  3e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  45.18 
 
 
212 aa  144  8.000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  42.79 
 
 
203 aa  144  1e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  44.02 
 
 
214 aa  142  3e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  43.78 
 
 
215 aa  140  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  43.35 
 
 
208 aa  140  9.999999999999999e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_008347  Mmar10_0374  multiple antibiotic resistance (MarC)-related proteins  42.51 
 
 
214 aa  140  1.9999999999999998e-32  Maricaulis maris MCS10  Bacteria  normal  normal  0.774303 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  41.38 
 
 
207 aa  139  3e-32  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  45.85 
 
 
205 aa  135  4e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  40.29 
 
 
209 aa  133  1.9999999999999998e-30  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  42.51 
 
 
209 aa  133  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  44.67 
 
 
215 aa  130  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_008709  Ping_1391  multiple antibiotic resistance (MarC)-related proteins  36 
 
 
198 aa  130  1.0000000000000001e-29  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  45.45 
 
 
212 aa  129  3e-29  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  39.59 
 
 
231 aa  129  4.0000000000000003e-29  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  40.78 
 
 
204 aa  127  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_008048  Sala_3099  multiple antibiotic resistance (MarC)-related proteins  44.17 
 
 
209 aa  126  2.0000000000000002e-28  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.554479  normal 
 
 
-
 
NC_004310  BR1098  hypothetical protein  37.56 
 
 
209 aa  122  4e-27  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1802  multiple antibiotic resistance (MarC)-related proteins  37.44 
 
 
207 aa  122  4e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0240208  normal  0.177395 
 
 
-
 
NC_007794  Saro_0268  multiple antibiotic resistance (MarC)-related proteins  42.65 
 
 
206 aa  122  6e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  37.56 
 
 
209 aa  121  8e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_007964  Nham_1763  multiple antibiotic resistance (MarC)-related proteins  36.59 
 
 
207 aa  119  3.9999999999999996e-26  Nitrobacter hamburgensis X14  Bacteria  normal  0.619286  n/a   
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  40.4 
 
 
209 aa  118  7e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  36.45 
 
 
206 aa  117  7.999999999999999e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  36.15 
 
 
214 aa  118  7.999999999999999e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  36.27 
 
 
211 aa  116  1.9999999999999998e-25  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  36.27 
 
 
211 aa  115  3.9999999999999997e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_008254  Meso_1399  multiple antibiotic resistance (MarC)-related proteins  41.92 
 
 
217 aa  115  5e-25  Chelativorans sp. BNC1  Bacteria  normal  0.557326  n/a   
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  29.95 
 
 
219 aa  115  6e-25  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  32.81 
 
 
202 aa  114  7.999999999999999e-25  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  34.76 
 
 
235 aa  114  1.0000000000000001e-24  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  32.84 
 
 
216 aa  113  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  36.14 
 
 
210 aa  113  2.0000000000000002e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  37.06 
 
 
209 aa  110  2.0000000000000002e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  36.95 
 
 
211 aa  108  4.0000000000000004e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2873  multiple antibiotic resistance (MarC)-related protein  44.14 
 
 
213 aa  108  4.0000000000000004e-23  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0453774 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  29.06 
 
 
207 aa  108  7.000000000000001e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  31.77 
 
 
204 aa  107  9.000000000000001e-23  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0272  multiple antibiotic resistance (MarC)-related proteins  35.03 
 
 
214 aa  107  1e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008009  Acid345_0603  multiple antibiotic resistance MarC-related protein  37.5 
 
 
216 aa  107  2e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  28.92 
 
 
213 aa  105  3e-22  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  38.05 
 
 
211 aa  105  6e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  34.3 
 
 
242 aa  103  1e-21  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  28.57 
 
 
208 aa  103  1e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  28.85 
 
 
213 aa  103  1e-21  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  34.03 
 
 
206 aa  103  1e-21  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0527  multiple antibiotic resistance (MarC)-related proteins  32.16 
 
 
212 aa  103  2e-21  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1270  multiple antibiotic resistance (MarC)-related protein  29.41 
 
 
213 aa  103  2e-21  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  31.91 
 
 
206 aa  103  2e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  32.45 
 
 
206 aa  102  3e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_007355  Mbar_A3711  multiple antibiotic resistance protein  35.23 
 
 
212 aa  102  3e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.372343  normal 
 
 
-
 
NC_009485  BBta_7793  putative multiple antibiotic resistance (MarC)-related protein  34.83 
 
 
202 aa  103  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  31.91 
 
 
206 aa  102  3e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  33.68 
 
 
206 aa  102  4e-21  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2825  integral membrane protein, MarC family  25.98 
 
 
207 aa  102  5e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  35.35 
 
 
203 aa  102  5e-21  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  35.08 
 
 
206 aa  100  1e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  31.38 
 
 
206 aa  100  1e-20  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  31.91 
 
 
206 aa  100  1e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  31.91 
 
 
206 aa  100  1e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0417  multiple antibiotic resistance (MarC)-related protein  33.67 
 
 
202 aa  99.8  2e-20  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2623  multiple antibiotic resistance (MarC)-related proteins  38.61 
 
 
217 aa  100  2e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  31.91 
 
 
207 aa  100  2e-20  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  35.08 
 
 
206 aa  99.8  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0717  multiple antibiotic resistance (MarC)-related protein  34.47 
 
 
217 aa  99.4  4e-20  Methanoculleus marisnigri JR1  Archaea  decreased coverage  0.000442646  n/a   
 
 
-
 
NC_013131  Caci_8100  multiple antibiotic resistance (MarC)-related protein  35.32 
 
 
203 aa  99  4e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  25.6 
 
 
212 aa  99.4  4e-20  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009675  Anae109_2587  multiple antibiotic resistance (MarC)-related protein  36.89 
 
 
229 aa  98.6  5e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.9732  normal  0.188603 
 
 
-
 
NC_009783  VIBHAR_00158  multiple antibiotic transporter  29.41 
 
 
208 aa  98.6  6e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_2804  multiple antibiotic resistance (MarC)-related protein  38.12 
 
 
217 aa  98.2  7e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0569832  n/a   
 
 
-
 
NC_011145  AnaeK_2709  multiple antibiotic resistance (MarC)-related protein  38.12 
 
 
217 aa  98.2  8e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2071  hypothetical protein  36.08 
 
 
214 aa  97.8  1e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0381177  n/a   
 
 
-
 
NC_009708  YpsIP31758_1962  hypothetical protein  36.08 
 
 
214 aa  97.8  1e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2949  hypothetical protein  30.85 
 
 
207 aa  97.1  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.514078  normal 
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  34.02 
 
 
211 aa  97.1  2e-19  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3071  MCP methyltransferase, CheR-type  30.1 
 
 
207 aa  96.7  2e-19  Saccharophagus degradans 2-40  Bacteria  normal  0.574672  normal  0.0243793 
 
 
-
 
NC_008255  CHU_1871  multiple antibiotic resistance protein  33.33 
 
 
218 aa  97.1  2e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.126971  hitchhiker  0.00141165 
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  30.57 
 
 
217 aa  97.1  2e-19  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2164  hypothetical protein  35.57 
 
 
214 aa  96.3  3e-19  Yersinia pestis Angola  Bacteria  normal  0.033055  normal  0.026113 
 
 
-
 
NC_008340  Mlg_1602  multiple antibiotic resistance (MarC)-related proteins  33.65 
 
 
248 aa  95.9  4e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0931799  normal 
 
 
-
 
NC_012856  Rpic12D_2879  multiple antibiotic resistance (MarC)-related protein  32.45 
 
 
207 aa  95.5  5e-19  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0513768 
 
 
-
 
NC_009654  Mmwyl1_2943  multiple antibiotic resistance (MarC)-related protein  26.9 
 
 
205 aa  95.5  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.434605 
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  33.87 
 
 
216 aa  95.5  5e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  33.87 
 
 
218 aa  95.5  5e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  31.91 
 
 
206 aa  95.1  6e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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