Gene MmarC5_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1406 
Symbol 
ID4927788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1348891 
End bp1349532 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content35% 
IMG OID640166902 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001097918 
Protein GI134046433 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAC AATTTGCAAT ACTGGCATTT ACATCATTAT TTTCCATATT AAACCCATTT 
GGAGTAATTC CAACGTATTT AGTTCTTACT AGCCAGTACT CCAAAGTTGA AAAAATCAAG
ATAATACGAA AATCCATGCT TGCAGCGTTT ATAATCCTTA TGATGTTTGC ACTGCTTGGA
AATCAGATTA TCGGGTTTTT TGGAATTTCA ATTCCTGCAA TCAAGATTAC GGGTGGAGTT
TTACTCTTTT TGATTGCACT CGACATGATT CAGGGAAACA CGTCTAAGGT AGAAAAAAGC
CCTAAACTTG AATCCCATTT AAAAAGCCAT GCTGAAGAAA TTGAAGAAAT GGATGAAATC
GCAATAGTTC CGTTAACTGT TCCTTTACTA ACTGGTCCAG GTTCTATCAG CGCAGTTATT
GCCATGATGG CACAGACGAG TGATTTTGAT GGAAAAATTT CGGTGATAAT TGCAATATCA
CTTTGTATAA TCATATCTTA CTTTGTGCTC AAGTTTTCAA AAGATCTGGA AAAAATGCTC
GGTAAAATAG GATTTAAGGT ACTTACAAAA ATGATGGGTC TTGTACTTAC CGCAATATCT
ATCCAAATGG CCCTTGATGG AATATTAATG GTCTTTGGAT AA
 
Protein sequence
MDVQFAILAF TSLFSILNPF GVIPTYLVLT SQYSKVEKIK IIRKSMLAAF IILMMFALLG 
NQIIGFFGIS IPAIKITGGV LLFLIALDMI QGNTSKVEKS PKLESHLKSH AEEIEEMDEI
AIVPLTVPLL TGPGSISAVI AMMAQTSDFD GKISVIIAIS LCIIISYFVL KFSKDLEKML
GKIGFKVLTK MMGLVLTAIS IQMALDGILM VFG