More than 300 homologs were found in PanDaTox collection
for query gene Sde_3071 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3071  MCP methyltransferase, CheR-type  100 
 
 
207 aa  405  1.0000000000000001e-112  Saccharophagus degradans 2-40  Bacteria  normal  0.574672  normal  0.0243793 
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  59.9 
 
 
202 aa  228  4e-59  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
NC_011312  VSAL_I2825  integral membrane protein, MarC family  51.01 
 
 
207 aa  209  2e-53  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_08146  multiple antibiotic resistance protein MarC  49.47 
 
 
204 aa  202  3e-51  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00158  multiple antibiotic transporter  50 
 
 
208 aa  191  6e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  36.92 
 
 
210 aa  127  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  37.11 
 
 
203 aa  127  1.0000000000000001e-28  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  38.02 
 
 
206 aa  125  4.0000000000000003e-28  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  38.02 
 
 
206 aa  125  4.0000000000000003e-28  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  35.68 
 
 
205 aa  125  6e-28  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  37.82 
 
 
207 aa  124  7e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  36.67 
 
 
205 aa  123  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  38.38 
 
 
208 aa  122  3e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  33.82 
 
 
209 aa  120  9.999999999999999e-27  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  37.81 
 
 
214 aa  119  3.9999999999999996e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  32.04 
 
 
212 aa  118  7e-26  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_009727  CBUD_1815  MarC family integral membrane protein  36.27 
 
 
197 aa  117  9e-26  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.862942  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0381  MarC membrane protein  36.27 
 
 
197 aa  117  9.999999999999999e-26  Coxiella burnetii RSA 331  Bacteria  normal  0.0139422  n/a   
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  31.68 
 
 
212 aa  117  9.999999999999999e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1098  hypothetical protein  33.84 
 
 
209 aa  117  1.9999999999999998e-25  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  32.5 
 
 
206 aa  116  1.9999999999999998e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  33.84 
 
 
207 aa  116  1.9999999999999998e-25  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_009524  PsycPRwf_1961  multiple antibiotic resistance (MarC)-related protein  28.99 
 
 
213 aa  115  3.9999999999999997e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  33.33 
 
 
209 aa  115  6.9999999999999995e-25  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_007406  Nwi_1802  multiple antibiotic resistance (MarC)-related proteins  33 
 
 
207 aa  114  1.0000000000000001e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0240208  normal  0.177395 
 
 
-
 
NC_004116  SAG2143  hypothetical protein  30.2 
 
 
203 aa  113  2.0000000000000002e-24  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0929738  n/a   
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  30.73 
 
 
215 aa  113  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  33.5 
 
 
203 aa  112  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  30.54 
 
 
206 aa  112  5e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  31.31 
 
 
209 aa  111  8.000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  34.17 
 
 
212 aa  110  1.0000000000000001e-23  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  31.58 
 
 
213 aa  110  1.0000000000000001e-23  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_007964  Nham_1763  multiple antibiotic resistance (MarC)-related proteins  33.5 
 
 
207 aa  110  1.0000000000000001e-23  Nitrobacter hamburgensis X14  Bacteria  normal  0.619286  n/a   
 
 
-
 
NC_008347  Mmar10_0374  multiple antibiotic resistance (MarC)-related proteins  33.18 
 
 
214 aa  109  2.0000000000000002e-23  Maricaulis maris MCS10  Bacteria  normal  normal  0.774303 
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  33.33 
 
 
216 aa  108  5e-23  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  33.33 
 
 
218 aa  108  6e-23  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  31.73 
 
 
219 aa  108  6e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  32.02 
 
 
211 aa  108  7.000000000000001e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  31.53 
 
 
210 aa  108  8.000000000000001e-23  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  28.14 
 
 
206 aa  107  1e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  27.5 
 
 
206 aa  107  1e-22  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  28.14 
 
 
206 aa  107  1e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  31.61 
 
 
217 aa  106  2e-22  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0635  multiple antibiotic resistance (MarC)-related proteins  28.57 
 
 
201 aa  106  2e-22  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.586575 
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  27 
 
 
206 aa  107  2e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  33.33 
 
 
209 aa  106  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  28.14 
 
 
206 aa  106  2e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_007969  Pcryo_0603  multiple antibiotic resistance (MarC)-related proteins  28.57 
 
 
201 aa  106  3e-22  Psychrobacter cryohalolentis K5  Bacteria  normal  0.708242  normal  0.450021 
 
 
-
 
NC_008825  Mpe_A2020  hypothetical protein  31.16 
 
 
200 aa  106  3e-22  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.991404 
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  27.64 
 
 
206 aa  105  4e-22  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  33.17 
 
 
209 aa  105  4e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  30.92 
 
 
219 aa  105  6e-22  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  34 
 
 
204 aa  105  6e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  30.33 
 
 
219 aa  103  2e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  27 
 
 
206 aa  103  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  36.22 
 
 
209 aa  103  2e-21  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2908  multiple antibiotic resistance (MarC)-related protein protein  34.72 
 
 
206 aa  102  3e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.275757  normal  0.0232741 
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  27 
 
 
206 aa  103  3e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  30.73 
 
 
235 aa  102  4e-21  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  30.54 
 
 
220 aa  102  4e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  31.22 
 
 
215 aa  102  5e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  31.34 
 
 
204 aa  102  5e-21  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0516  multiple antibiotic resistance (MarC)-related protein  30.65 
 
 
200 aa  101  7e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0622801  normal  0.581317 
 
 
-
 
NC_010681  Bphyt_3442  multiple antibiotic resistance (MarC)-related protein  31 
 
 
199 aa  101  7e-21  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00112955  hitchhiker  0.00103877 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  31.82 
 
 
207 aa  101  8e-21  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  31.34 
 
 
219 aa  101  8e-21  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010084  Bmul_2795  multiple antibiotic resistance (MarC)-related protein  31.84 
 
 
202 aa  100  1e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2873  multiple antibiotic resistance (MarC)-related protein  37.14 
 
 
213 aa  100  1e-20  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0453774 
 
 
-
 
NC_013456  VEA_002930  multiple antibiotic transporter  29.41 
 
 
212 aa  100  1e-20  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000449619  n/a   
 
 
-
 
NC_008390  Bamb_0491  multiple antibiotic resistance (MarC)-related proteins  30.15 
 
 
200 aa  100  1e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.51349  n/a   
 
 
-
 
NC_008309  HS_1233  hypothetical protein  31.19 
 
 
208 aa  99.8  2e-20  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  32.12 
 
 
216 aa  99.4  3e-20  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0514  multiple antibiotic resistance (MarC)- related protein, putative transporter  32 
 
 
199 aa  99.8  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.708119 
 
 
-
 
NC_009712  Mboo_0686  multiple antibiotic resistance (MarC)-related protein  30.61 
 
 
216 aa  99.4  3e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.666037 
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  31.53 
 
 
211 aa  99.4  3e-20  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  31 
 
 
211 aa  99.4  3e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  27 
 
 
206 aa  99.4  3e-20  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2648  multiple antibiotic resistance (MarC)-related protein  32.66 
 
 
197 aa  99  5e-20  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0417  multiple antibiotic resistance (MarC)-related protein  29.61 
 
 
202 aa  99  5e-20  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  32 
 
 
211 aa  99  5e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  26 
 
 
206 aa  98.6  5e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  31.55 
 
 
211 aa  98.6  6e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_009654  Mmwyl1_2943  multiple antibiotic resistance (MarC)-related protein  30.05 
 
 
205 aa  98.2  7e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.434605 
 
 
-
 
NC_009783  VIBHAR_03019  hypothetical protein  28.92 
 
 
212 aa  98.2  8e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008542  Bcen2424_0588  multiple antibiotic resistance (MarC)-related proteins  29.15 
 
 
200 aa  98.2  8e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0558  multiple antibiotic resistance (MarC)-related protein  29.15 
 
 
200 aa  98.2  8e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.137031  hitchhiker  0.000600217 
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  30.73 
 
 
242 aa  97.4  1e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3058  multiple antibiotic resistance (MarC)-related protein  32.66 
 
 
197 aa  97.8  1e-19  Ralstonia pickettii 12J  Bacteria  normal  0.429511  normal 
 
 
-
 
NC_013421  Pecwa_4140  putative dITP- and XTP- hydrolase  30.48 
 
 
197 aa  97.4  1e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1553  multiple antibiotic resistance (MarC)-related proteins  35.71 
 
 
210 aa  97.8  1e-19  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.460198 
 
 
-
 
NC_009076  BURPS1106A_3519  MarC membrane protein  30 
 
 
200 aa  96.7  2e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.311354  n/a   
 
 
-
 
NC_010622  Bphy_2645  multiple antibiotic resistance (MarC)-related protein  32.51 
 
 
201 aa  96.7  2e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3481  MarC membrane protein  30 
 
 
200 aa  96.7  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.371296  n/a   
 
 
-
 
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