Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2020 |
Symbol | |
ID | 4784240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2162411 |
End bp | 2163013 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640090590 |
Product | hypothetical protein |
Protein accession | YP_001021213 |
Protein GI | 124267209 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.991404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACA GCTTCGTCTC CGCCTTCGTC CTGCTGCTGC TGGTGCTCGA CCCCTTCGGC AGCCTGCCGA TCTTCATCTC GGTGCTGAAG GGCGTGCCGC CCGAGCGGCG CACCCGCGTG GCGGTGCGAG AGGTGCTGAT CGCCTTCTGC GTGCTGCTGG CCTTCATGTT CGCGGGGCAG GGCTTCCTGA ACCTGATGCA CCTGTCGGAG CGCTCGCTCG AGGTGGCCGG CGGCGTGATC CTGCTGATCA TCGCGATCCG CATGATCTTC ACGTCGGGCT CGCAGATCTA CGCGTCCGAC GGGGGCGCGC GCGAGCCCTT CATCTTCCCG CTCGCGGTGC CGCTGCTGGC CGGGCCGTCG GCGATGGCCA CGGTGCTGCT GCTGGCCTCG CGGCAGCCGC AGCAGCTGAT GCAATGGGTC GGCGCGGTCA GCGCGGCGAT GCTGGTGTGC GGCGCGGTGA TGCTGGCGGC CGACCGCATC CGCAAGCTGC TCGGACACTC GATGGTGTCG GCGATCGAGA AGCTGATGGG CCTGGTGCTG ACCGCGGTGG CGGTGGAGAT GATCCTGGCG GGGTTGAAGC GCTACTTCTT TGACAGCCTT TGA
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Protein sequence | MDHSFVSAFV LLLLVLDPFG SLPIFISVLK GVPPERRTRV AVREVLIAFC VLLAFMFAGQ GFLNLMHLSE RSLEVAGGVI LLIIAIRMIF TSGSQIYASD GGAREPFIFP LAVPLLAGPS AMATVLLLAS RQPQQLMQWV GAVSAAMLVC GAVMLAADRI RKLLGHSMVS AIEKLMGLVL TAVAVEMILA GLKRYFFDSL
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