Gene Mpe_A2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2020 
Symbol 
ID4784240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2162411 
End bp2163013 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID640090590 
Producthypothetical protein 
Protein accessionYP_001021213 
Protein GI124267209 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.991404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACA GCTTCGTCTC CGCCTTCGTC CTGCTGCTGC TGGTGCTCGA CCCCTTCGGC 
AGCCTGCCGA TCTTCATCTC GGTGCTGAAG GGCGTGCCGC CCGAGCGGCG CACCCGCGTG
GCGGTGCGAG AGGTGCTGAT CGCCTTCTGC GTGCTGCTGG CCTTCATGTT CGCGGGGCAG
GGCTTCCTGA ACCTGATGCA CCTGTCGGAG CGCTCGCTCG AGGTGGCCGG CGGCGTGATC
CTGCTGATCA TCGCGATCCG CATGATCTTC ACGTCGGGCT CGCAGATCTA CGCGTCCGAC
GGGGGCGCGC GCGAGCCCTT CATCTTCCCG CTCGCGGTGC CGCTGCTGGC CGGGCCGTCG
GCGATGGCCA CGGTGCTGCT GCTGGCCTCG CGGCAGCCGC AGCAGCTGAT GCAATGGGTC
GGCGCGGTCA GCGCGGCGAT GCTGGTGTGC GGCGCGGTGA TGCTGGCGGC CGACCGCATC
CGCAAGCTGC TCGGACACTC GATGGTGTCG GCGATCGAGA AGCTGATGGG CCTGGTGCTG
ACCGCGGTGG CGGTGGAGAT GATCCTGGCG GGGTTGAAGC GCTACTTCTT TGACAGCCTT
TGA
 
Protein sequence
MDHSFVSAFV LLLLVLDPFG SLPIFISVLK GVPPERRTRV AVREVLIAFC VLLAFMFAGQ 
GFLNLMHLSE RSLEVAGGVI LLIIAIRMIF TSGSQIYASD GGAREPFIFP LAVPLLAGPS
AMATVLLLAS RQPQQLMQWV GAVSAAMLVC GAVMLAADRI RKLLGHSMVS AIEKLMGLVL
TAVAVEMILA GLKRYFFDSL