Gene Bcav_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2908 
Symbol 
ID7861327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3249618 
End bp3250238 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content70% 
IMG OID643867006 
Productmultiple antibiotic resistance (MarC)-related protein protein 
Protein accessionYP_002882915 
Protein GI229821389 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.275757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0232741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCGA TCATCGACGT CACGCTGTTC TCGACGACGT TCCTCACGTT GTTCGTCATC 
ATGGACCCGC CCGGGACCGT GCCCGTGTTC CTCGCGCTGA CGTCGACGAT GACGGCGAAG
CAGCGGGCGC GCGCGGCGCT GCAGGCGGTC TACGTGGCGT TCGGCGTCAT CATGGCGTTC
ACGCTGTTCG GGCAGGCGAT CCTGCGGTTC CTGCACATCT CGGTCCCGGC GCTGCAGGCG
TCGGGCGGGT TGCTCCTGCT CCTCGTGGCG CTCGAGCTGC TCACCGGGAA GGCGGAGGAG
CCGCAGCCGT CCGGGCGCGG CGTCAACGTC GCGCTCGTGC CGCTCGGGAC GCCGCTGCTC
GCTGGACCTG GGGCGATCGT CGCGTCGATG CTCGCCGTGC AGCAGGGTGA CGGCGACGTG
GCGTCCTGGG TGGCGATCAT CGCGGCCATC GTGCTCGTCC ACGTCAGCCT GTGGATCGCG
ATGCGGTTCG CCGGCGTCAT CCACCGCGTG CTCGGTGAGG GTGGCACCAC GCTCGTCACC
CGGATCGCCG GTCTGCTGCT GGCCGCGATC GCCGTGCAGC TCATCGCCGA CGCCGTCCGG
GCATTCGTGC TCGAGGGCTG A
 
Protein sequence
MSSIIDVTLF STTFLTLFVI MDPPGTVPVF LALTSTMTAK QRARAALQAV YVAFGVIMAF 
TLFGQAILRF LHISVPALQA SGGLLLLLVA LELLTGKAEE PQPSGRGVNV ALVPLGTPLL
AGPGAIVASM LAVQQGDGDV ASWVAIIAAI VLVHVSLWIA MRFAGVIHRV LGEGGTTLVT
RIAGLLLAAI AVQLIADAVR AFVLEG