| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3071 |
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| Symbol | |
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| ID | 3965414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3922794 |
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| End bp | 3923417 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637922168 |
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| Product | MCP methyltransferase, CheR-type |
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| Protein accession | YP_528540 |
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| Protein GI | 90022713 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.574672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0243793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGATT ATTTGGCCGT TTTTATAACC TTTTTTGCAG TTATAGACCC AATAGGCACC
GTGCCGGTGT TTATTGCTGT AACGCGTGAG TACGATCAAA AAACAAAGCG TCGTATAGCA
TTGCTGGCCA CTATTGTTGC TGCGTGTGTA TTGCTGTTTT TTGTGGTTAT AGGCGAAATA
ATCCTAAAGG CGCTATCTAT TCCGCTTTCG GCATTTCAGA TATCTGGGGG GATAGTGTTA
TTTCTGTTTG CGCTTAATAT GATTTTTGGA GACAGTAAAC CAGAAGAAGA GATTAAGTTT
CTAGAGGATG ATCACAAGGA TACGGCTATT TTCCCGTTGG CCGTGCCCTC CATTGCTAGC
CCTGGGGCAA TGTTGGCGGC TGTGCTGCTA ACAGAAAACG CAATATTCAG TTTGTTCGAG
CAAGTTCAAA CAGTGGTAAT GATGTTGCTG GTTTTGGTAG TGGTTTACAT ATTAATGCTC
TTGTCCGGGT TCATTACTCG ATTTATTGGT ACTAGCGGTG CCAGCGTGGT AAGCCGGGTA
ATGGGATTGA TTTTATCTGC AATTGCTACC ACTAATATAT TAACGGGTAT TAATGAATAC
TATCAATTTG TGCCAGCGTC ATAG
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| Protein sequence | MIDYLAVFIT FFAVIDPIGT VPVFIAVTRE YDQKTKRRIA LLATIVAACV LLFFVVIGEI
ILKALSIPLS AFQISGGIVL FLFALNMIFG DSKPEEEIKF LEDDHKDTAI FPLAVPSIAS
PGAMLAAVLL TENAIFSLFE QVQTVVMMLL VLVVVYILML LSGFITRFIG TSGASVVSRV
MGLILSAIAT TNILTGINEY YQFVPAS
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