Gene Ping_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1553 
Symbol 
ID4626418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1902497 
End bp1903129 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID639796748 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_942958 
Protein GI119945278 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.460198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA CTGCAGGATT AGCACTAGCA ACATTCTTTG CAACGATAGG GCCATTAGAT 
GTTGCCGCGG TATTTGCTGC GTTAACAGCA AATCAAACTG ATCAACAAAA ACGGACGGTG
GCTATTCGTG GCACGCTAAT TGGTACCGCT ATTCTGGTAG CATTTGCGTT GGTCGGAGAA
TTGCTGTTAT CTAGTCTCGG TATATCTCTT GCAGCACTGA GAGCTGCCGG TGGTATTCTT
TTATTGCTTA TCGGTATTGA TATGGTGTTT GCGCGGTCTT CAGGAGGTAC ATCTACCACC
GACGATGAGG AGAAAGAAGC GATCTCCAAA ACGGATATTT CAGTTTTTCC ATTAGCGACA
CCTCTAATTG CGGGACCAGG TGCAATGGGA TCAGCTATTT TACTTATGGC TAATCAGCAT
GGAGATTTAA CGGGTCAGGT GATAATCATT TTCTCGCTAT TGGCAATCTT GTTTCTGACA
TTCATATCGT TGCTGCTTGC AAGCAAGCTC CAAAATTTGC TTGGCATTAC GGGAATGCAT
GTCATCACCC GTGTTATGGG CGTATTGTTG ACTGCCTTGG CAGTTCAATT CATTTTTGAT
GGCATTAAGC AAAGTGGTCT GGTTGCCCTC TAA
 
Protein sequence
MIETAGLALA TFFATIGPLD VAAVFAALTA NQTDQQKRTV AIRGTLIGTA ILVAFALVGE 
LLLSSLGISL AALRAAGGIL LLLIGIDMVF ARSSGGTSTT DDEEKEAISK TDISVFPLAT
PLIAGPGAMG SAILLMANQH GDLTGQVIII FSLLAILFLT FISLLLASKL QNLLGITGMH
VITRVMGVLL TALAVQFIFD GIKQSGLVAL