Gene PsycPRwf_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1961 
Symbol 
ID5204835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2443478 
End bp2444119 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID640600193 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001280851 
Protein GI148653758 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG AAATTGTCAA AATAATTTTG GCATTTGTGG TACTAATTAA CCCCTTTAGT 
GCCTTAACGC TATTTTTAGA TTCGACTCGT GGCTATAGCA TGACTGATAA GCGCCGCTTT
GCGCGTATCA GTAGTTTGAC GGTGTTTATT ACCATTGCTT TTTTTACCGT CGCTGGTGAG
ACCTTACTTA AAGTGCTGGG CATCTCAGTG GGCTCGTTCC AAATTGCTGG TGGGGTATTG
GTATTTTTGA TTGCCATTAA CATGATGAAT GGCGAGGGTA ATCCGGTAAA GCCCAATCAA
GAAAACGTGG AAGTTGATGA CAGCTTTGAG AGCATAGGCA GTACCGCCGC TGCCGTTGTG
CCTTTGGCCA TTCCGATGAT GGTGGGACCA GGCGGGATTT CTACCGTTAT TATTTACTCA
GCACAAGTGA CAGGTTGGCA GCAGAAGTTA GCCATCATTA TCGCCGGTTT GCTCATTTCT
ATATTTTGTT ATTTGGCTTT AATGGCCGCC GGTCAGCTAA GCCGGTTCTT AGGTGACACC
GGTCTTAATA TTATTAGCCG TATCATGGGT ATGCTGCTTG CAGCGGTGGC CATCGAAATC
TTGGTCAATG GTATTAAGAC TGTTTTTCCT GGTCTGATCT AA
 
Protein sequence
MDTEIVKIIL AFVVLINPFS ALTLFLDSTR GYSMTDKRRF ARISSLTVFI TIAFFTVAGE 
TLLKVLGISV GSFQIAGGVL VFLIAINMMN GEGNPVKPNQ ENVEVDDSFE SIGSTAAAVV
PLAIPMMVGP GGISTVIIYS AQVTGWQQKL AIIIAGLLIS IFCYLALMAA GQLSRFLGDT
GLNIISRIMG MLLAAVAIEI LVNGIKTVFP GLI