Gene Dgeo_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2143 
Symbol 
ID4058878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2256076 
End bp2256720 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID641231183 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_605606 
Protein GI94986242 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTGG CCGAACTCTC CAGCATCAGC CTTCAGACCT TTCTGACCAT GCTGGTGGTG 
ATGGATCCGA TTGGCCTGGC ACCGATCTTT ATCGGGCTGG CCGGGAACCG CCCCAGCTTC
GAGCGGCGGC GCATGGCGCT GCGGGCCTCC GTGGTGGCCG GGGTGATTAT CCTCTGCTTT
GGGCTGTTCG GGCGGGGACT GCTGGATCAC CTGGGAATCA GCCTGAGCGC CTTCCGGGTC
GCAGGCGGCA TCCTGCTGTT TCTAATCGCG CTCGACATGG TCTTTGCGCG CCCCAGCGGC
AGCAAGGAAA CACCCGAGGA GGGCCAGGAG GCCCAAGAAC GCCAGGACAT CAGCGTCTTC
CCGCTGGCCA TTCCGCTGAT TGCCGGACCC GGCACGCTCG CGAGCATCAT GATTCTGGCG
GGAGACGCAC ACGGCAACCC GGCCCTGCTC GCGGCTGTCT TTGTGGTGAC CTTCCTGGTC
CTGCTGCTGT GTTATTTGGC GCTGCGCCTC AGTGGCCAGA TTGCCCGGGT CATTGGCGTG
ACTGGCGTCC ATGTCGTTAC CCGCGTGCTG GGCGTGCTGC TGGGGGCACT GGCCGTGCAG
TACGTCGCGG ACGGCGCGCT GGAATTCTTG CGCGGCGCCG CCTGA
 
Protein sequence
MNVAELSSIS LQTFLTMLVV MDPIGLAPIF IGLAGNRPSF ERRRMALRAS VVAGVIILCF 
GLFGRGLLDH LGISLSAFRV AGGILLFLIA LDMVFARPSG SKETPEEGQE AQERQDISVF
PLAIPLIAGP GTLASIMILA GDAHGNPALL AAVFVVTFLV LLLCYLALRL SGQIARVIGV
TGVHVVTRVL GVLLGALAVQ YVADGALEFL RGAA