| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1125 |
|---|
| Symbol | |
|---|
| ID | 5084557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1151084 |
|---|
| End bp | 1151707 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640482683 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001167331 |
|---|
| Protein GI | 146277172 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0974003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA TGGGCTTCCT CGTCACCGCC TTCGCCACGC TCTTCGTGGT GGTCGATCCG
CTGGGGCTGG TGCCGCTCTT CATCGCGCTG ACACCGGGCA TGACGCGCGA ACAGCGCCGC
GCGATCGGAC TGCGCGCCTG TTTCGTGGCG GTGGGCATCC TCACCACCTT CGGCCTTCTG
GGCGAGGCGG TGCTGGGCTT CATCGGCATC TCGATGCCCG CCTTCCGCAT CGCGGGCGGG
ATCCTTCTGT TCCTGACCGC GCTCGACATG CTCTTCGAGC GCCGGACCCA GCGCCGCGAG
GGCCAGACCG CGGCCGAGCC GCACGACCAC GACCCGTCCG TCTTCCCGCT CGCGATCCCG
CTCATCGCCG GCCCCGGCGC CATCGCCTCG ATGATCCTGC TCGTGGGGGC GGCCGACGGC
TGGCAGGGCG TTCTGGCCGT CCATCTCGTC ATGCTGGTGA CCGTGGTCTC GGCCTTTCTG
CTGTTCCTCG TGGCGGGCCC GCTGGAACGG CTGCTCGGGC GCACGGGAAC GCTCGTGATC
ACGCGGCTTC TGGGGATGCT GCTGGCCGCG CTCTCCGTCC AGTTCGTGAT CGACGGCATC
CGCGGCTCGG GCCTGCTGGG ATAG
|
|---|
| Protein sequence | MIEMGFLVTA FATLFVVVDP LGLVPLFIAL TPGMTREQRR AIGLRACFVA VGILTTFGLL
GEAVLGFIGI SMPAFRIAGG ILLFLTALDM LFERRTQRRE GQTAAEPHDH DPSVFPLAIP
LIAGPGAIAS MILLVGAADG WQGVLAVHLV MLVTVVSAFL LFLVAGPLER LLGRTGTLVI
TRLLGMLLAA LSVQFVIDGI RGSGLLG
|
|---|
| |