| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3316 |
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| Symbol | |
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| ID | 5614140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4031095 |
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| End bp | 4031754 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934254 |
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| Product | multiple antibiotic resistance protein |
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| Protein accession | YP_001475048 |
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| Protein GI | 157376448 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0229288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGGAC TCTGGTTGCA TCTTGGGACA GTTTTTATGG GGTTCTTTGC CATAATGAAC
CCTATTGCCA ATGTACCGAT ATTTTTGGGG TTAACCTCTG AGGAGGATGA ACAGACGACG
AAAGCGATTG CCTTCAGAGC ACTCCTGCTG GCATTTATTA TCATCACTGT TTTTGCTCTG
ATGGGGCAGT TTATCTTCAC TCTGTTTGGT ATATCTCTCT CTGCATTTCG TATCACTGGG
GGATTTCTGG TTTTTTTAAT TGGCTTTCAT ATGCTACAGG GCAATAATTC CAGTGTGCAT
CATCCTGATA GTGCTCAGGT TGAGGAGAGT AAAGCCAAGA GCGGCGATAC ACAGAGGGAG
GCTGCATTGA GTATTGCGGT ATCTCCGCTG GCACTGCCCA TACTTGCAGG TCCCGGCACC
ATAGCGACGG CGATGAGTTT CTCTGCTGTA GGGGGAGTCG CCGAAATGCT GATCACCATA
GGTACCTTTG GCGCTCTATG CGTAGTGACG TATCTGTTCT TTATTTTTGG CGGCAGGTTG
GTCAACTACC TGGGGAGTGC CGCGCTGGGT GCTATTACGC GTATGATGGG GTTGATCCTG
GCCGTCATCG GAACTCAGAT GGCCATAGAG GGCATAAAAG GCGCATTTGC TATCGGGTAG
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| Protein sequence | MDGLWLHLGT VFMGFFAIMN PIANVPIFLG LTSEEDEQTT KAIAFRALLL AFIIITVFAL
MGQFIFTLFG ISLSAFRITG GFLVFLIGFH MLQGNNSSVH HPDSAQVEES KAKSGDTQRE
AALSIAVSPL ALPILAGPGT IATAMSFSAV GGVAEMLITI GTFGALCVVT YLFFIFGGRL
VNYLGSAALG AITRMMGLIL AVIGTQMAIE GIKGAFAIG
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