More than 300 homologs were found in PanDaTox collection
for query gene Swit_2873 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_2873  multiple antibiotic resistance (MarC)-related protein  100 
 
 
213 aa  402  1e-111  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0453774 
 
 
-
 
NC_008048  Sala_3099  multiple antibiotic resistance (MarC)-related proteins  71.43 
 
 
209 aa  238  4e-62  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.554479  normal 
 
 
-
 
NC_007794  Saro_0268  multiple antibiotic resistance (MarC)-related proteins  66.67 
 
 
206 aa  218  5e-56  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0374  multiple antibiotic resistance (MarC)-related proteins  60.29 
 
 
214 aa  213  1.9999999999999998e-54  Maricaulis maris MCS10  Bacteria  normal  normal  0.774303 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  53.92 
 
 
205 aa  191  9e-48  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  50.48 
 
 
207 aa  188  5.999999999999999e-47  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  50 
 
 
203 aa  184  9e-46  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  50.96 
 
 
215 aa  177  1e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  48.6 
 
 
209 aa  174  9e-43  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  47.12 
 
 
207 aa  170  1e-41  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  49.53 
 
 
209 aa  166  2e-40  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  47.06 
 
 
206 aa  165  5.9999999999999996e-40  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  47.06 
 
 
206 aa  165  5.9999999999999996e-40  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  50.48 
 
 
215 aa  164  6.9999999999999995e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_004310  BR1098  hypothetical protein  44.55 
 
 
209 aa  162  3e-39  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  44.55 
 
 
209 aa  161  6e-39  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  47.64 
 
 
211 aa  161  7e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  51.2 
 
 
205 aa  161  8.000000000000001e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  46.77 
 
 
210 aa  160  1e-38  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  45.05 
 
 
209 aa  160  1e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  51.98 
 
 
208 aa  160  1e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  47.06 
 
 
214 aa  160  2e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  43.48 
 
 
209 aa  152  2.9999999999999998e-36  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  45.15 
 
 
212 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  46.7 
 
 
212 aa  147  2.0000000000000003e-34  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  42.79 
 
 
235 aa  143  2e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_008709  Ping_1391  multiple antibiotic resistance (MarC)-related proteins  37.62 
 
 
198 aa  141  7e-33  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  44.93 
 
 
206 aa  141  8e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1802  multiple antibiotic resistance (MarC)-related proteins  44.93 
 
 
207 aa  138  4.999999999999999e-32  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0240208  normal  0.177395 
 
 
-
 
NC_007964  Nham_1763  multiple antibiotic resistance (MarC)-related proteins  44.93 
 
 
207 aa  137  1e-31  Nitrobacter hamburgensis X14  Bacteria  normal  0.619286  n/a   
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  42.08 
 
 
242 aa  136  2e-31  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1399  multiple antibiotic resistance (MarC)-related proteins  43.5 
 
 
217 aa  133  1.9999999999999998e-30  Chelativorans sp. BNC1  Bacteria  normal  0.557326  n/a   
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  36.36 
 
 
231 aa  133  1.9999999999999998e-30  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  41.63 
 
 
204 aa  132  3e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_011312  VSAL_I2825  integral membrane protein, MarC family  34.74 
 
 
207 aa  130  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  41.67 
 
 
209 aa  129  3e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  37.02 
 
 
210 aa  129  5.0000000000000004e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  38.05 
 
 
202 aa  129  5.0000000000000004e-29  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
NC_013889  TK90_2079  multiple antibiotic resistance (MarC)-related protein  43.75 
 
 
209 aa  128  8.000000000000001e-29  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00616176  normal 
 
 
-
 
NC_008340  Mlg_1602  multiple antibiotic resistance (MarC)-related proteins  41.58 
 
 
248 aa  125  4.0000000000000003e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0931799  normal 
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  34.62 
 
 
204 aa  125  4.0000000000000003e-28  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  33.17 
 
 
220 aa  122  4e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014230  CA2559_08146  multiple antibiotic resistance protein MarC  36.95 
 
 
204 aa  122  5e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1553  multiple antibiotic resistance (MarC)-related proteins  45.54 
 
 
210 aa  122  6e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.460198 
 
 
-
 
NC_010465  YPK_2071  hypothetical protein  34.3 
 
 
214 aa  121  9.999999999999999e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0381177  n/a   
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  33.33 
 
 
219 aa  120  9.999999999999999e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1962  hypothetical protein  34.3 
 
 
214 aa  121  9.999999999999999e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2703  hypothetical protein  34.3 
 
 
214 aa  120  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000872945  hitchhiker  0.000692167 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  37.62 
 
 
216 aa  120  1.9999999999999998e-26  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  33.33 
 
 
214 aa  119  3e-26  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_010159  YpAngola_A2164  hypothetical protein  33.82 
 
 
214 aa  119  3e-26  Yersinia pestis Angola  Bacteria  normal  0.033055  normal  0.026113 
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  32.68 
 
 
213 aa  119  3.9999999999999996e-26  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  31.73 
 
 
219 aa  117  9.999999999999999e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_007955  Mbur_0527  multiple antibiotic resistance (MarC)-related proteins  30.62 
 
 
212 aa  116  1.9999999999999998e-25  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00158  multiple antibiotic transporter  35.24 
 
 
208 aa  115  3.9999999999999997e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  33.33 
 
 
219 aa  114  8.999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_011726  PCC8801_2011  multiple antibiotic resistance (MarC)-related protein  33.5 
 
 
226 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2036  multiple antibiotic resistance (MarC)-related protein  33.5 
 
 
226 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.0819991  normal 
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  35.15 
 
 
219 aa  114  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  32.85 
 
 
203 aa  113  2.0000000000000002e-24  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  32.7 
 
 
211 aa  113  2.0000000000000002e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3071  MCP methyltransferase, CheR-type  33.33 
 
 
207 aa  113  2.0000000000000002e-24  Saccharophagus degradans 2-40  Bacteria  normal  0.574672  normal  0.0243793 
 
 
-
 
NC_012856  Rpic12D_2648  multiple antibiotic resistance (MarC)-related protein  37.13 
 
 
197 aa  112  4.0000000000000004e-24  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3058  multiple antibiotic resistance (MarC)-related protein  37.13 
 
 
197 aa  112  5e-24  Ralstonia pickettii 12J  Bacteria  normal  0.429511  normal 
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  32.18 
 
 
217 aa  112  6e-24  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  32.35 
 
 
211 aa  111  7.000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_009441  Fjoh_0364  multiple antibiotic resistance (MarC)-related protein  30.05 
 
 
231 aa  111  8.000000000000001e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  0.840532  n/a   
 
 
-
 
NC_010658  SbBS512_E1407  hypothetical protein  31.73 
 
 
215 aa  111  8.000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  0.090251  n/a   
 
 
-
 
NC_011353  ECH74115_1726  hypothetical protein  31.73 
 
 
215 aa  111  8.000000000000001e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.345038  normal  0.523448 
 
 
-
 
NC_010498  EcSMS35_1900  hypothetical protein  31.73 
 
 
215 aa  111  8.000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  0.382554  normal  0.103806 
 
 
-
 
CP001509  ECD_01216  predicted inner membrane protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2386  hypothetical protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli ATCC 8739  Bacteria  normal  0.377039  hitchhiker  0.00000152892 
 
 
-
 
CP001637  EcDH1_2408  multiple antibiotic resistance (MarC)-related protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.0000022238  n/a   
 
 
-
 
NC_008825  Mpe_A2020  hypothetical protein  33.01 
 
 
200 aa  111  9e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.991404 
 
 
-
 
NC_009801  EcE24377A_1390  hypothetical protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli E24377A  Bacteria  normal  0.718233  n/a   
 
 
-
 
NC_009800  EcHS_A1351  hypothetical protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli HS  Bacteria  hitchhiker  0.000939425  n/a   
 
 
-
 
NC_012892  B21_01226  hypothetical protein  31.73 
 
 
215 aa  111  9e-24  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1580  hypothetical protein  30.77 
 
 
215 aa  110  1.0000000000000001e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.439502  normal 
 
 
-
 
NC_011094  SeSA_A1881  hypothetical protein  30.77 
 
 
215 aa  110  1.0000000000000001e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.66407 
 
 
-
 
NC_011083  SeHA_C1938  hypothetical protein  30.77 
 
 
215 aa  110  1.0000000000000001e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.476555 
 
 
-
 
NC_011080  SNSL254_A1875  hypothetical protein  30.77 
 
 
215 aa  110  1.0000000000000001e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.67019  normal 
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  31.19 
 
 
211 aa  111  1.0000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_011149  SeAg_B1397  hypothetical protein  30.77 
 
 
215 aa  110  1.0000000000000001e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.126468  n/a   
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  30.05 
 
 
207 aa  110  2.0000000000000002e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  30.1 
 
 
213 aa  110  2.0000000000000002e-23  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1961  multiple antibiotic resistance (MarC)-related protein  34.16 
 
 
213 aa  108  4.0000000000000004e-23  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  31.86 
 
 
208 aa  108  6e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2587  multiple antibiotic resistance (MarC)-related protein  38.21 
 
 
229 aa  108  8.000000000000001e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.9732  normal  0.188603 
 
 
-
 
NC_009635  Maeo_1199  multiple antibiotic resistance (MarC)-related protein  29.85 
 
 
217 aa  108  8.000000000000001e-23  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  29.61 
 
 
213 aa  108  9.000000000000001e-23  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  32.02 
 
 
207 aa  107  9.000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2303  hypothetical protein  29.47 
 
 
215 aa  107  1e-22  Enterobacter sp. 638  Bacteria  normal  0.45168  normal 
 
 
-
 
NC_009712  Mboo_0686  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
216 aa  107  2e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.666037 
 
 
-
 
NC_007355  Mbar_A3711  multiple antibiotic resistance protein  32.23 
 
 
212 aa  106  2e-22  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.372343  normal 
 
 
-
 
NC_007955  Mbur_0272  multiple antibiotic resistance (MarC)-related proteins  28.71 
 
 
214 aa  107  2e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  32.21 
 
 
212 aa  106  2e-22  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_010338  Caul_4773  multiple antibiotic resistance (MarC)-related protein  39.05 
 
 
231 aa  105  3e-22  Caulobacter sp. K31  Bacteria  normal  normal  0.366276 
 
 
-
 
NC_009457  VC0395_A1620  hypothetical protein  33.49 
 
 
212 aa  105  3e-22  Vibrio cholerae O395  Bacteria  normal  0.079521  n/a   
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  33.17 
 
 
216 aa  105  4e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  29 
 
 
212 aa  105  4e-22  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
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