Gene ECH74115_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1726 
Symbol 
ID6968331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1664137 
End bp1664784 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID643385680 
Producthypothetical protein 
Protein accessionYP_002270172 
Protein GI209398127 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.345038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.523448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCAGA CCCTTTTTGA TTTTCCCGTT TACTTCAAAT TTTTCATCGG GTTATTTGCG 
CTGGTCAACC CGGTAGGGAT TATTCCCGTC TTTATCAGCA TGACCAGTTA TCAGACAGCG
GCAGCGCGAA ACAAAACTAA CCTTACAGCC AACCTGTCTG TGGCCATTAT CTTGTGGATC
TCGCTTTTTC TCGGCGACAC GATTCTGCAA CTTTTTGGTA TATCAATTGA TTCGTTCCGT
ATCGCCGGGG GCATCCTGGT GGTGACGATA GCGATGTCGA TGATCAGCGG CAAGCTTGGC
GAGGATAAAC AGAACAAGCA AGAAAAATCA GAAACCGCGG TACGTGAAAG TATTGGTGTG
GTGCCATTGG CGTTGCCGTT GATGGCGGGG CCAGGGGCGA TCAGTTCTAC CATCGTCTGG
GGTACGCGTT ATCACAGCAT TAGCTATCTG TTTGGTTTCT TTGTGGCTAT TGCATTGTTC
GCTTTATGTT GTTGGGGATT GTTCCGCATG GCACCGTGGC TGGTACGGGT TTTACGCCAG
ACCGGCATCA ACGTGATTAC GCGTATTATG GGGCTATTGC TGATGGCATT GGGGATTGAA
TTTATCGTTA CTGGTATTAA GGGGATTTTC CCCGGCCTGC TTAATTAA
 
Protein sequence
MIQTLFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA AARNKTNLTA NLSVAIILWI 
SLFLGDTILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAVRESIGV
VPLALPLMAG PGAISSTIVW GTRYHSISYL FGFFVAIALF ALCCWGLFRM APWLVRVLRQ
TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLLN