Gene SbBS512_E1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1407 
Symbol 
ID6272564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1287491 
End bp1288138 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID641725511 
Producthypothetical protein 
Protein accessionYP_001880020 
Protein GI187733137 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.090251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTCAGA CCTTTTTTGA TTTTCCCGTT TACTTCAAAT TTTTCATCGG GTTATTTGCG 
CTGGTCAACC CGGTAGGGAT TATTCCCGTC TTTATCAGCA TGACCAGTTA TCAGACAGCG
GCAGCGCGAA ACAAAACTAA CCTTACAGCC AACCTGTCTG TGGCCATTAT CTTGTGGATC
TCGCTTTTTC TCGGCGACAC GATTCTGCAA CTTTTTGGTA TATCAATTGA TTCGTTCCGT
ATCGCCGGGG GCATCCTGGT GGTGACGATA GCGATGTCGA TGATCAGCGG CAAGCTTGGC
GAGGATAAAC AGAACAAGCA AGAAAAATCA GAAACCGCGG TACGTGAAAG CATTGGTGTG
GTGCCATTGG CGTTGCCGTT GATGGCGGGG CCAGGGGCGA TCAGTTCTAC CATCGTCTGG
GGTACGCGTT ATCACAGCAT TAGCTATCTG TTTGGTTTCT TTGTGGCTAT TGCATTGTTC
GCTTTATGTT GCTGGGGATT GTTCCGCATG GCACCTTGGC TGGTACGGGT TTTACGCCAG
ACCGGCATCA ACGTGATTAC GCGTATTATG GGGCTATTGC TGATGGCATT GGGGATTGAA
TTTATCGTTA CTGGTATTAA GGGGATTTTC CCCGGCCTGA TTAATTAA
 
Protein sequence
MIQTFFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA AARNKTNLTA NLSVAIILWI 
SLFLGDTILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAVRESIGV
VPLALPLMAG PGAISSTIVW GTRYHSISYL FGFFVAIALF ALCCWGLFRM APWLVRVLRQ
TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLIN