| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2518 |
|---|
| Symbol | |
|---|
| ID | 3835952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2928767 |
|---|
| End bp | 2929402 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637826626 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_427605 |
|---|
| Protein GI | 83593853 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.135192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT CCTTGTTATC GCAGATCACC ACCTTGCTCG TTCTTGTCGA TCCGCTGGGT
CTGCTGGCGA TTTTCGTCGG GCTGACCGCC GGGCGACCGG CGGCCTATCG CCGTCAGGTG
GCGATCAAGG GTACCTTGCT CGCCACCTTC GTGCTCGTCG CCTTCGCCGT GGCCGGCGGT
AAATTCCTGC ATTTGCTGGG GATCGACATC TCGGCCTTCC GTATCGCCGG CGGCCTGATG
CTGCTGGTGC TGGCCCATGA GATGATCTTC GCCAAGCGCA CCATCCGCCG CAACGAAAGC
GCCAAGGCCA TGGACAAGGA GATGGGCGGC GAAACCTCCG ATCCCAGCGT CTTTCCCTTG
GCCATCCCGC TGATCGCCGG TCCCGGGGCG ATCACCGCCG TGTTGCTGTT CTCGCGCGAA
AGCGATGGCA CCGCCATTGG CCTGATGTGG GTGATCGTCG CCATTCTGGC CGTGACCTTG
CCCACGCTCG CCCTTCTGCT GACCGCCGGG GCGGTCCAGC GCATGCTGGG CGAAACCCTG
ACCCATACGC TCGACCGCCT GCTCGGCATT ATCCTGGGCG CCTTGGCCGT CCAGTTCATC
ATCAGCGGCG CCAAGGAGGC CCTGGGCGCC CTGTAA
|
|---|
| Protein sequence | MIDSLLSQIT TLLVLVDPLG LLAIFVGLTA GRPAAYRRQV AIKGTLLATF VLVAFAVAGG
KFLHLLGIDI SAFRIAGGLM LLVLAHEMIF AKRTIRRNES AKAMDKEMGG ETSDPSVFPL
AIPLIAGPGA ITAVLLFSRE SDGTAIGLMW VIVAILAVTL PTLALLLTAG AVQRMLGETL
THTLDRLLGI ILGALAVQFI ISGAKEALGA L
|
|---|
| |