| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1763 |
|---|
| Symbol | |
|---|
| ID | 4032938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1965589 |
|---|
| End bp | 1966212 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637970233 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_577037 |
|---|
| Protein GI | 92117308 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.619286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCTGG ACTACGCGCT GACGACTTTT GTAACGCTCG CCGTAGTGGT CGATCCGATC
GGTCTGGCCC CGGCATTTCT GTCGATTACC CAAGGCCTGT CGAAAGCCGC CCGGCGCGAC
ACCGGATGGC GCGCCGCGAC CATCGCGGCC GCCGTTCTGA TCGCGACGGC GCTCGGCGGC
ACATGGCTGC TCGCCCGGCT CGGAATTGGC CTCCCCGCCT TCCGCATCTC CGGCGGCATC
CTGCTATTCG CGGTTGCTTT CGAGATGGTG CTGGGCGTTC GGCCGGCGCG GGAGGCCAAG
CAAGCCGAGC AGGCGGTCGA GGAGCACGCG CGAAACATCG CGGCGTTTCC GCTGGCGATC
CCGATGATCG CAGGTCCCGG GGCAATCACT GCCACGCTGC TGCTGGCCGG ACGCACGGCC
GGCGATCCCC TTCAACTGAT AGCGCTGATC GTCATCATCG TTGCGGTCGC CATCATCAGC
GGAGCCACGT TCGCGGTTGC GGGGCGTGTC GCCGGCGCGC TCGGCAACAC CGGCAATGTC
GTGCTGTCGC GGCTGCTCGG CGTGGTGCTG GCGGCGCTCG CCGTGCAATT CGTCATCGAT
GGCTGCCGCG AGGCGTTCGG CTGA
|
|---|
| Protein sequence | MLLDYALTTF VTLAVVVDPI GLAPAFLSIT QGLSKAARRD TGWRAATIAA AVLIATALGG
TWLLARLGIG LPAFRISGGI LLFAVAFEMV LGVRPAREAK QAEQAVEEHA RNIAAFPLAI
PMIAGPGAIT ATLLLAGRTA GDPLQLIALI VIIVAVAIIS GATFAVAGRV AGALGNTGNV
VLSRLLGVVL AALAVQFVID GCREAFG
|
|---|
| |