Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0558 |
Symbol | |
ID | 6122239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 614277 |
End bp | 614879 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637121 |
Product | multiple antibiotic resistance (MarC)-related protein |
Protein accession | YP_001763858 |
Protein GI | 170731911 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.137031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000600217 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAATACA CGTTCCTGTC GGCCACCGTG CTCCTCGTGC TGATCACGGA TCCGCTCGGC AACATCCCGC TGTTCATTTC GGCGATGCGG GATGTGCCGC GCGAGCGGCG CGTGAAGCTG ATCCTGCGCG AAGTGGGGAT CGCGTTCGTG ATCCTGCTGT TCTTCATGCT GGTCGGCGAC CGCTTCCTGC GGATGATGAG CCTCACCGAC CTGTCGCTGC GGCTCGGCGG CGGGATCGTG CTGTTCCTGA TCGCGCTGCG GATGATCTTC CCGCATCCGG ACGGCGCGCT CGGCAGCGAT CCGCGCGCGG GCGGCGAGCC GTTCATCGTG CCGCTCGCGA TTCCGGCGCT GGCCGGGCCG TCCGCGCTCG CGACGGTGAT GCTGATGACG TCGCAGGCGC CCGGCAAGAT GCTCGAGTGG GTCGGCGCGC TGACGGTCAC GATGATCGTC TGCGCGATCA CGCTGGTGCT GGCCGAGCGG ATTCAGCAGT GGCTCGGCGA GCGGACGGTC GCCGCGTTCG AGCGGCTGAT GGGCCTCGTG CTGGTGGCGA TTTCGGTCGA GATGCTGCTG GCCGGCATCC GCGCGTTCGT GCACCAGTTA TAA
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Protein sequence | MEYTFLSATV LLVLITDPLG NIPLFISAMR DVPRERRVKL ILREVGIAFV ILLFFMLVGD RFLRMMSLTD LSLRLGGGIV LFLIALRMIF PHPDGALGSD PRAGGEPFIV PLAIPALAGP SALATVMLMT SQAPGKMLEW VGALTVTMIV CAITLVLAER IQQWLGERTV AAFERLMGLV LVAISVEMLL AGIRAFVHQL
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