Gene Bphyt_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3442 
Symbol 
ID6284251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3874052 
End bp3874651 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID642623015 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001897056 
Protein GI187925414 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00103877 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGTACA CCTTCCTGTC CGCGACCGTC CTGCTGATTC TGATCACCGA TCCGCTCGGC 
AACATTCCGC TCTTCGTCAG TTGTCTGCGC AGTGTGTCTC CGAAGCGGCG CACGATCGTC
ATCCTCCGCG AGGTGGCGAT CGCGTTTGCG ATCCTGCTGA TCTTCATGGT GGTCGGCGAC
CGTTTTCTGC GCATGATGAG CCTGACCGAC CAGTCATTGC GTATCGGCGG CGGGATCGTG
TTGTTTCTGA TTGCGCTCAG AATGGTGTTT CCGCATCCGG ACGGTCCATT CGGCGGCGAC
ACGCGCGGCG GCGAGCCGCT CATCGTCCCG CTCGCCATTC CGGCACTGGC AGGTCCGTCG
GCGCTGGCCA CCGTGATGCT GCTGACGTCG CAGGCGCCCG GCAAGATGTT TGAGTGGATC
GGCGCGCTGA CTGTCACGAT GGTTGTCTGC GCGATCGTGC TGATGCTGGC GGAGCGCATT
CAGGCATGGC TCGGCGAGCG CGCGATGATG GCGTTCGAAC GGCTGATGGG TCTCGTGCTG
GTGGCGATTT CGGTGGAGAT GATGCTCGGC GGGATTCGGT CGTTCGTGCA TCAACTTTGA
 
Protein sequence
MEYTFLSATV LLILITDPLG NIPLFVSCLR SVSPKRRTIV ILREVAIAFA ILLIFMVVGD 
RFLRMMSLTD QSLRIGGGIV LFLIALRMVF PHPDGPFGGD TRGGEPLIVP LAIPALAGPS
ALATVMLLTS QAPGKMFEWI GALTVTMVVC AIVLMLAERI QAWLGERAMM AFERLMGLVL
VAISVEMMLG GIRSFVHQL