More than 300 homologs were found in PanDaTox collection
for query gene Acry_2273 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_2273  BadM/Rrf2 family transcriptional regulator  100 
 
 
97 aa  187  4e-47  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3308  transcriptional regulator, BadM/Rrf2 family  66.32 
 
 
161 aa  118  3e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0515375  normal  0.0430175 
 
 
-
 
NC_007643  Rru_A2574  BadM/Rrf2 family transcriptional regulator  55.67 
 
 
154 aa  105  2e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0892  transcriptional regulator, BadM/Rrf2 family  54.84 
 
 
157 aa  98.2  4e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0888  transcriptional regulator, BadM/Rrf2 family  54.84 
 
 
157 aa  98.2  4e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0902  BadM/Rrf2 family transcriptional regulator  51.11 
 
 
155 aa  95.1  3e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.646682  normal 
 
 
-
 
NC_007760  Adeh_0842  BadM/Rrf2 family transcriptional regulator  53.76 
 
 
157 aa  94.4  5e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1191  transcriptional regulator, BadM/Rrf2 family  47.83 
 
 
168 aa  90.9  6e-18  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000485487  n/a   
 
 
-
 
NC_007484  Noc_2491  hypothetical protein  47.92 
 
 
158 aa  89.7  1e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1232  BadM/Rrf2 family transcriptional regulator  46.39 
 
 
155 aa  89  2e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.618772  n/a   
 
 
-
 
NC_009511  Swit_2919  BadM/Rrf2 family transcriptional regulator  51.06 
 
 
134 aa  87.4  6e-17  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.71182 
 
 
-
 
NC_010513  Xfasm12_0819  hypothetical protein  47.31 
 
 
153 aa  85.1  3e-16  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0540  BadM/Rrf2 family transcriptional regulator  48.39 
 
 
150 aa  85.1  3e-16  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0730  BadM/Rrf2 family transcriptional regulator  47.31 
 
 
153 aa  85.1  3e-16  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0675  BadM/Rrf2 family transcriptional regulator  52.69 
 
 
166 aa  84.3  5e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.329049 
 
 
-
 
NC_011071  Smal_1002  transcriptional regulator, TrmB  51.65 
 
 
151 aa  84  6e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.283031 
 
 
-
 
NC_010717  PXO_01980  Rrf2 family protein  47.83 
 
 
152 aa  83.6  8e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.491455  n/a   
 
 
-
 
NC_008340  Mlg_0724  BadM/Rrf2 family transcriptional regulator  45.16 
 
 
153 aa  82.4  0.000000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0993  Rrf2 family protein  47.25 
 
 
153 aa  81.3  0.000000000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0194  BadM/Rrf2 family transcriptional regulator  47.37 
 
 
146 aa  80.9  0.000000000000006  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4268  BadM/Rrf2 family transcriptional regulator  42.71 
 
 
154 aa  80.5  0.000000000000007  Polaromonas sp. JS666  Bacteria  normal  0.463591  normal 
 
 
-
 
NC_013440  Hoch_3285  transcriptional regulator, BadM/Rrf2 family  52.56 
 
 
273 aa  80.1  0.00000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.794723  normal  0.278795 
 
 
-
 
NC_011662  Tmz1t_1900  transcriptional regulator, BadM/Rrf2 family  45.36 
 
 
171 aa  77  0.00000000000007  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1366  transcriptional regulator, BadM/Rrf2 family  42.11 
 
 
159 aa  74.7  0.0000000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1265  transcriptional regulator, BadM/Rrf2 family  42.11 
 
 
160 aa  74.3  0.0000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1516  FeS assembly SUF system regulator  46.74 
 
 
153 aa  73.9  0.0000000000006  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1449  Rrf2 family protein  46.74 
 
 
153 aa  73.9  0.0000000000006  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.302493  n/a   
 
 
-
 
NC_013216  Dtox_1607  transcriptional regulator, BadM/Rrf2 family  39.78 
 
 
144 aa  73.9  0.0000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.690617  normal 
 
 
-
 
NC_006368  lpp0651  hypothetical protein  45.16 
 
 
153 aa  73.2  0.000000000001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_2583  BadM/Rrf2 family transcriptional regulator  41.05 
 
 
159 aa  73.2  0.000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.293791  n/a   
 
 
-
 
NC_009483  Gura_2164  BadM/Rrf2 family transcriptional regulator  39.18 
 
 
137 aa  72.8  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000000101301  n/a   
 
 
-
 
NC_009675  Anae109_1277  BadM/Rrf2 family transcriptional regulator  39.8 
 
 
158 aa  73.2  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl0635  hypothetical protein  44.09 
 
 
153 aa  72.4  0.000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_1295  rrf2 family protein  43.01 
 
 
137 aa  70.9  0.000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3546  BadM/Rrf2 family transcriptional regulator  41.05 
 
 
141 aa  70.9  0.000000000006  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00044677  normal 
 
 
-
 
NC_007644  Moth_2094  BadM/Rrf2 family transcriptional regulator  37.63 
 
 
136 aa  68.9  0.00000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.65276  normal 
 
 
-
 
NC_012850  Rleg_0421  iron-responsive transcriptional regulator  38.54 
 
 
160 aa  68.9  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0531604  hitchhiker  0.00267682 
 
 
-
 
NC_009077  Mjls_3930  BadM/Rrf2 family transcriptional regulator  45.45 
 
 
162 aa  68.6  0.00000000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.162755 
 
 
-
 
NC_011369  Rleg2_0389  iron-responsive transcriptional regulator  38.54 
 
 
160 aa  68.6  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00187363  normal  0.229909 
 
 
-
 
NC_012918  GM21_3015  transcriptional regulator, BadM/Rrf2 family  39.58 
 
 
136 aa  68.2  0.00000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_3915  BadM/Rrf2 family transcriptional regulator  45.45 
 
 
162 aa  68.6  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  0.36857  n/a   
 
 
-
 
NC_008705  Mkms_3989  BadM/Rrf2 family transcriptional regulator  45.45 
 
 
162 aa  68.6  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1931  BadM/Rrf2 family transcriptional regulator  39.18 
 
 
135 aa  67.8  0.00000000005  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000501375  normal 
 
 
-
 
NC_009565  TBFG_11313  hypothetical protein  45.45 
 
 
161 aa  67.4  0.00000000006  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1639  Rrf2 family protein  39.18 
 
 
136 aa  65.9  0.0000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.132012  n/a   
 
 
-
 
NC_013131  Caci_2760  transcriptional regulator, BadM/Rrf2 family  46.51 
 
 
145 aa  65.9  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0485  BadM/Rrf2 family transcriptional regulator  34 
 
 
145 aa  65.9  0.0000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0373904  normal 
 
 
-
 
NC_009668  Oant_3617  iron-responsive transcriptional regulator  38.3 
 
 
153 aa  65.5  0.0000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.973931  n/a   
 
 
-
 
NC_013510  Tcur_3300  transcriptional regulator, BadM/Rrf2 family  46.51 
 
 
154 aa  65.9  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00214095  n/a   
 
 
-
 
NC_008726  Mvan_4419  BadM/Rrf2 family transcriptional regulator  43.18 
 
 
158 aa  65.5  0.0000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0838  iron-responsive transcriptional regulator  36.46 
 
 
156 aa  65.1  0.0000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1268  transcriptional regulator, BadM/Rrf2 family  37.5 
 
 
137 aa  65.1  0.0000000003  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.000000462831  n/a   
 
 
-
 
NC_009338  Mflv_2276  BadM/Rrf2 family transcriptional regulator  43.18 
 
 
158 aa  65.1  0.0000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.802156 
 
 
-
 
NC_009636  Smed_0328  iron-responsive transcriptional regulator  38.3 
 
 
154 aa  64.7  0.0000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.069835 
 
 
-
 
NC_013739  Cwoe_4604  transcriptional regulator, BadM/Rrf2 family  46.67 
 
 
152 aa  63.9  0.0000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.580547  normal 
 
 
-
 
NC_013216  Dtox_2932  transcriptional regulator, BadM/Rrf2 family  36.56 
 
 
143 aa  63.9  0.0000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000242173  normal  0.835381 
 
 
-
 
NC_009253  Dred_2964  BadM/Rrf2 family transcriptional regulator  38.3 
 
 
137 aa  63.5  0.0000000009  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00065561  n/a   
 
 
-
 
NC_010338  Caul_3724  BadM/Rrf2 family transcriptional regulator  40.22 
 
 
146 aa  63.5  0.0000000009  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0655  transcriptional regulator, BadM/Rrf2 family  46.59 
 
 
154 aa  63.5  0.0000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0512003  normal  0.640764 
 
 
-
 
NC_008148  Rxyl_2356  BadM/Rrf2 family transcriptional regulator  38.89 
 
 
154 aa  63.2  0.000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1800  BadM/Rrf2 family transcriptional regulator  41.84 
 
 
150 aa  63.5  0.000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2061  BadM/Rrf2 family transcriptional regulator  40.66 
 
 
156 aa  63.2  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.836249  normal 
 
 
-
 
NC_014151  Cfla_3442  transcriptional regulator, BadM/Rrf2 family  42.53 
 
 
152 aa  62.4  0.000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.11487  hitchhiker  0.00712317 
 
 
-
 
NC_013131  Caci_0350  transcriptional regulator, BadM/Rrf2 family  41.3 
 
 
151 aa  62.4  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.076588 
 
 
-
 
NC_009504  BOV_A0528  iron-responsive transcriptional regulator  33.67 
 
 
153 aa  62.4  0.000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0503  transcriptional regulator, BadM/Rrf2 family  36.67 
 
 
167 aa  62.8  0.000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.715595 
 
 
-
 
NC_008254  Meso_1445  iron-responsive transcriptional regulator  34.04 
 
 
153 aa  62.4  0.000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3397  hypothetical protein  36.56 
 
 
172 aa  62  0.000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4419  BadM/Rrf2 family transcriptional regulator  39.08 
 
 
152 aa  62  0.000000003  Nocardioides sp. JS614  Bacteria  normal  0.305649  n/a   
 
 
-
 
NC_013530  Xcel_1977  transcriptional regulator, BadM/Rrf2 family  43.82 
 
 
168 aa  61.6  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.954132  n/a   
 
 
-
 
NC_013173  Dbac_3187  transcriptional regulator, BadM/Rrf2 family  35.48 
 
 
153 aa  61.2  0.000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0562  iron-responsive transcriptional regulator  33.67 
 
 
153 aa  61.2  0.000000005  Brucella suis 1330  Bacteria  normal  0.23721  n/a   
 
 
-
 
NC_013946  Mrub_0921  BadM/Rrf2 family transcriptional regulator  43.01 
 
 
173 aa  60.8  0.000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.343392 
 
 
-
 
NC_008782  Ajs_2120  BadM/Rrf2 family transcriptional regulator  43.08 
 
 
179 aa  60.8  0.000000006  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_5030  BadM/Rrf2 family transcriptional regulator  35.71 
 
 
145 aa  60.5  0.000000007  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0992  transcriptional regulator, BadM/Rrf2 family  35.42 
 
 
144 aa  60.5  0.000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.263725  n/a   
 
 
-
 
NC_013440  Hoch_4174  transcriptional regulator, BadM/Rrf2 family  36.27 
 
 
183 aa  60.1  0.000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3156  Rrf2 family transcriptional regulator  41.49 
 
 
200 aa  60.1  0.000000009  Salinispora tropica CNB-440  Bacteria  normal  0.99979  normal  0.133381 
 
 
-
 
NC_013173  Dbac_0577  transcriptional regulator, BadM/Rrf2 family  34.38 
 
 
138 aa  60.1  0.00000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.683729  n/a   
 
 
-
 
NC_013131  Caci_3768  transcriptional regulator, BadM/Rrf2 family  42.53 
 
 
151 aa  60.1  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0499  BadM/Rrf2 family transcriptional regulator  35.11 
 
 
153 aa  59.7  0.00000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.1941  normal 
 
 
-
 
NC_013947  Snas_3781  transcriptional regulator, BadM/Rrf2 family  40.7 
 
 
149 aa  59.3  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.882683  hitchhiker  0.00269563 
 
 
-
 
NC_007333  Tfu_0800  BadM/Rrf2 family transcriptional regulator  44.83 
 
 
150 aa  58.5  0.00000003  Thermobifida fusca YX  Bacteria  normal  0.314405  n/a   
 
 
-
 
NC_009953  Sare_3381  BadM/Rrf2 family transcriptional regulator  40.43 
 
 
156 aa  58.5  0.00000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.168418 
 
 
-
 
NC_010682  Rpic_3608  transcriptional regulator, BadM/Rrf2 family  33.67 
 
 
159 aa  58.2  0.00000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3286  transcriptional regulator, BadM/Rrf2 family  33.67 
 
 
159 aa  58.2  0.00000004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2618  BadM/Rrf2 family transcriptional regulator  37.36 
 
 
156 aa  58.2  0.00000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0818  transcriptional regulator, BadM/Rrf2 family  32.61 
 
 
126 aa  58.2  0.00000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2078  BadM/Rrf2 family transcriptional regulator  37.89 
 
 
148 aa  57.8  0.00000005  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.0000000011336  hitchhiker  0.00000000000000153974 
 
 
-
 
NC_013739  Cwoe_5399  transcriptional regulator, BadM/Rrf2 family  35.48 
 
 
157 aa  57.8  0.00000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1168  BadM/Rrf2 family transcriptional regulator  36.08 
 
 
134 aa  57.8  0.00000005  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000000039809  n/a   
 
 
-
 
NC_008255  CHU_0197  BadM/Rrf2 family transcriptional regulator  38.04 
 
 
140 aa  57.4  0.00000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1906  transcriptional regulator, BadM/Rrf2 family  39.13 
 
 
137 aa  57.4  0.00000006  Ammonifex degensii KC4  Bacteria  decreased coverage  0.0000482606  n/a   
 
 
-
 
NC_008687  Pden_3024  BadM/Rrf2 family transcriptional regulator  38 
 
 
145 aa  57.8  0.00000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1447  Rrf2 family protein  37.36 
 
 
143 aa  57.4  0.00000007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0973586  n/a   
 
 
-
 
NC_008044  TM1040_2272  BadM/Rrf2 family transcriptional regulator  36.96 
 
 
154 aa  57  0.00000008  Ruegeria sp. TM1040  Bacteria  normal  0.257031  normal  0.323507 
 
 
-
 
NC_008554  Sfum_1291  BadM/Rrf2 family transcriptional regulator  36.67 
 
 
133 aa  57  0.00000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_013501  Rmar_2009  transcriptional regulator, BadM/Rrf2 family  39.18 
 
 
142 aa  57  0.00000009  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3341  BadM/Rrf2 family transcriptional regulator  34.04 
 
 
145 aa  56.2  0.0000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5208  transcriptional regulator protein-like protein  42.17 
 
 
154 aa  56.2  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0660583  normal 
 
 
-
 
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