Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4419 |
Symbol | |
ID | 4596938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4674566 |
End bp | 4675024 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639779030 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_925603 |
Protein GI | 119718638 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.305649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAGTCT CCGCGAAGTC CGACTACGCC CTGCGTGCGC TGATCGAGAT GGCCTCGCGC GCGGATGGTC GGGCCGTGAG CGCGGAGGAG CTCGGCCGGC TCCAGGAGAT CCCGCACGGC TTCCTCCAGG CGATCCTCGC CGACCTGCGC CGGGCCGGGA TCGTGATGTC CCAGCGCGGC CAGTCGGGCG GCTGGCGGAT GGGCCGGTCC GCGGCGGACG TCTCGGTCGC GGACGTGATC CGTGCGGTGG ACGGCCCCCT GGTCTCGGTC TACGGGCTGC GCCCCGAGGC GGTCAGCTAC AACGAGGCCG CGGACGTGCT CCAGCACGTG TGGATCGCCG CCCGCCACTC CCTGCGCGAC GTCTTCGAGC AGGTCTCGAT CCAGCAGCTC GCCGACGGCC GGCTCCCCGA CGCGGTCACC ACCCGCACGG CCGACGAGGA CGCCTGGCAG CCCCACTAG
|
Protein sequence | MRVSAKSDYA LRALIEMASR ADGRAVSAEE LGRLQEIPHG FLQAILADLR RAGIVMSQRG QSGGWRMGRS AADVSVADVI RAVDGPLVSV YGLRPEAVSY NEAADVLQHV WIAARHSLRD VFEQVSIQQL ADGRLPDAVT TRTADEDAWQ PH
|
| |