Gene Ajs_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2120 
Symbol 
ID4671939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2238621 
End bp2239160 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID639839191 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_986365 
Protein GI121594469 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTT ACAGTGCTGG CGTGGAATAC GGTATCCATT GCCTGTTGTT TTTAGTCGAC 
GAGCGCGGTG AAACTCGTGA TTCCAGCGTG CGCGACCTGG CCGAGTTGCA AGGCGTGCCG
CAGGAATACC TGGCCAAGGT CTTCACCAAG CTGGCCCGTG CCGGGCTGGT GGCGGCCACC
GAAGGCGTGC GCGGCGGCTT CCGCCTGGCG CGGCCGGCGG CGCAGATCAG CGTGCTGGAT
ATCGTCCATG CCATTGATGG ACCAAAGAAG ATCTTCGATT GCCGCGAGGT GCGCGAGCGT
TGTACCTTGT TCGACGGCTC GCCGCCGCGT TGGGCGACCG AGGGTACCTG TGCGATCCAC
GCAGTGATGC TGGGGGCGCA GAAGCGCATG GAAGAGTCAT TGGCACAGCA GACTGTGCTG
GACCTGGCCA TGCGCTTCGG GCGCAAGGCC CCGGCTGAAT TTGGCCAGCA GGTCGATGCC
TGGATGGGTG AGCGGCGGGA GGCCAAGGGG GCTGGGGATA TTCCGGTAGA CCAGGTGTGA
 
Protein sequence
MSLYSAGVEY GIHCLLFLVD ERGETRDSSV RDLAELQGVP QEYLAKVFTK LARAGLVAAT 
EGVRGGFRLA RPAAQISVLD IVHAIDGPKK IFDCREVRER CTLFDGSPPR WATEGTCAIH
AVMLGAQKRM EESLAQQTVL DLAMRFGRKA PAEFGQQVDA WMGERREAKG AGDIPVDQV