Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0197 |
Symbol | |
ID | 4185576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 241992 |
End bp | 242414 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070206 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_676829 |
Protein GI | 110636622 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTTCCA AAAAAGCTAA ATATGCACTT AAGGCCCTGC TTTTTCTATC TAAAAATACG GATAGAGGTG TGGTTCTCAT TGCTGAAATT TCTGAAACAG AAGGCATTCC GAAAAAATTT TTAGAACAGA TTCTACTTGA ATTAAAAAAA CAAGGCATTT TACAAAGTAA ACGCGGAAAA GAAGGCGGCT ATTTTCTTGG AAAACCTGCA AATGAAATTG GAATTGGACA GGTAGTACGG ATTATTGACG GACCACTGGC TCCAATACCT TGTGTAAGCA AAATGGCATA TCGCCGGTGT GACGAATGTA TTGATGAGAA AACCTGTGAA ATCCGAAATT TATTTTTGCA AGTTCGTGAT GCGACCATAG AAATTTTGGA TAAGACTTCT TTATCTGATC TGGAACAAAA AAATATTTTG TAA
|
Protein sequence | MLSKKAKYAL KALLFLSKNT DRGVVLIAEI SETEGIPKKF LEQILLELKK QGILQSKRGK EGGYFLGKPA NEIGIGQVVR IIDGPLAPIP CVSKMAYRRC DECIDEKTCE IRNLFLQVRD ATIEILDKTS LSDLEQKNIL
|
| |