| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1445 |
|---|
| Symbol | rirA |
|---|
| ID | 4179367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1538972 |
|---|
| End bp | 1539433 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638067334 |
|---|
| Product | iron-responsive transcriptional regulator |
|---|
| Protein accession | YP_674006 |
|---|
| Protein GI | 110633798 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTA CCCGGCAAAC GAATTATGCA ATTCGAATTC TGATGTATTG CGCGGCGAAT
GAAGGCCGCC TCAGCCGGAT TCCCGACATT GCTCAAGCTT ATTCCCTGTC CGACCTTTTT
CTTTTCAAAA TCCTTCAACC CCTGGTCGAG GCCGGGTTCG TGCAGACGGT GCGCGGCCGC
AACGGTGGTG TGAAGCTTGG CAAACCGGCC GAGGACATCA CTTTGTTCGA CGTCATCCGT
GTCACGGAAG AGAGCTTTGC CATGGCGGAG TGCTTCGAGA ACGATACGGA GTGTCCGCTC
GTCGATGGCT GCGGGCTGAA TGAGGCGCTG CGTAAGGCGC TAGGCGCATT CTTCGAGGTT
CTTGCCTCCT ACACGATCCA GGATTTGGTC GACGCGCGCC CGAACATGCG CGATGTATTG
GGCTTGGAAG TGCAGCAAGT TCCATTAGCC ACAACCGTCT AG
|
|---|
| Protein sequence | MRLTRQTNYA IRILMYCAAN EGRLSRIPDI AQAYSLSDLF LFKILQPLVE AGFVQTVRGR
NGGVKLGKPA EDITLFDVIR VTEESFAMAE CFENDTECPL VDGCGLNEAL RKALGAFFEV
LASYTIQDLV DARPNMRDVL GLEVQQVPLA TTV
|
|---|
| |