Gene Sare_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3381 
Symbol 
ID5703416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3905823 
End bp3906293 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content72% 
IMG OID641272808 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001538174 
Protein GI159038921 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.168418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CCGCCCGGGT CGACTACGCC CTCCGTGCGG TTGCCGAGCT CGCCTCGGTG 
ACGAGTGGTG TCTCGACCGG TCGAGGGCGG ACTGTGACGG CTGACCAGAT CGCTCGCGCG
CAGGAGATCC CCCCGAAGTT CCTGGAGAGC ATCCTGTTGC AGCTGCGTCG GGGCGGCGTG
GTGCGCGCCC AGCGGGGCCC GGAGGGTGGC TACTGGTTGG CCCGGCCGGC GGAGGAGATC
TCCCTGGCCG AGGTGATCCG GGTGATCGAC GGGCCGCTGG CCCACGTCCG TGGGCAGCGC
CCGGAACAGC TCGGCTACCA CGGTGCGGCG CGAGCGTTAC AGGACGTGTG GATCGCCCTG
CGGGCCAGCG AACGCCAGAT CCTTGAGCTG GTCACGGTGG CTGACGTGGC CGGCGGTACC
CTCCCGCCGC GGGTTACCGA CCTGGTCGCC GACCCGCGCG CCTGGACCTG A
 
Protein sequence
MRLSARVDYA LRAVAELASV TSGVSTGRGR TVTADQIARA QEIPPKFLES ILLQLRRGGV 
VRAQRGPEGG YWLARPAEEI SLAEVIRVID GPLAHVRGQR PEQLGYHGAA RALQDVWIAL
RASERQILEL VTVADVAGGT LPPRVTDLVA DPRAWT