Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0421 |
Symbol | rirA |
ID | 8011623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 437487 |
End bp | 437969 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644823016 |
Product | iron-responsive transcriptional regulator |
Protein accession | YP_002974270 |
Protein GI | 241203174 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0531604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00267682 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGGTTGA CGAAGCAGAC GAACTATGCG GTTCGCATGT TGATGTATTG TGCTGCCAAT GACGGGCATT TGAGCCGGAT TCCCGAAATC GCCAGGGCCT ATGGCGTTTC CGAGCTCTTT CTTTTCAAGA TCCTTCAGCC GCTGAACAAG GCGGGTCTGG TCGAAACCGT TCGCGGTCGC AATGGCGGCG TGCGCTTGGG CAAGCCGGCC GCCGACATTA GTCTTTTCGA CGTCGTTCGG GTGACGGAAG ACAGCTTCGC CATGGCCGAA TGCTTCGAGG ATGACGGTGA GGTCGACTGC CCGCTGGTCG ATAGCTGTGG TTTGAATTCG GCGCTGCGCA AGGCGCTCAA TGCCTTCTTC GCGGTGCTGT CGGAATATTC CATCGATGAC CTCGTTAAGG CGCGTCCGCA GATCAATTTC CTTCTCGGAA TCACCGGCGA GCCAGCCTAT CGCAAACCCT CGATCGTTGC CCCCGCCGCC TGA
|
Protein sequence | MRLTKQTNYA VRMLMYCAAN DGHLSRIPEI ARAYGVSELF LFKILQPLNK AGLVETVRGR NGGVRLGKPA ADISLFDVVR VTEDSFAMAE CFEDDGEVDC PLVDSCGLNS ALRKALNAFF AVLSEYSIDD LVKARPQINF LLGITGEPAY RKPSIVAPAA
|
| |