| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0724 |
|---|
| Symbol | |
|---|
| ID | 4268691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 806230 |
|---|
| End bp | 806691 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638125473 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_741568 |
|---|
| Protein GI | 114319885 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTACGGA TTAACAGAGA AACCGACTAC GGCATAGGCA TCCTGACGGC CATGGCGCGG
GCGCCGGAGC AGCGTTTCAG CACCGTCCGC CTCGCTGATC AGCAGGGCCT GCCGCAGCCT
ATGGTGGCCA AGATCCTCAA GAATCTGGCC CGCGCGGGGA TTCTCGTCTC CTACCGTGGC
GCCAAGGGCG GCTATGGGCT GGCGCGTCCC GCCCGTCAGA TCTCGGTGGC CGAGATCATT
ACCGCCCTTG AGGGGCCCAT TGCCTTCACC GAGTGTGTGG AGGAGGGCGT GGATGCCTGC
CAGTACGGCG ATGCCTGCAC CACCAGTGCC AACTGGTGGC GGATCAGCCA GGTGGTGCAG
CATGCCCTGG GCAGCATCAG CCTGAAGGAC ATGAGCGAGC CGGTGGTGCC GTTGCGCATG
ATGGCGCCCC GGGCCGGCTC CCTCAAGGGG GATGCTTCGT GA
|
|---|
| Protein sequence | MVRINRETDY GIGILTAMAR APEQRFSTVR LADQQGLPQP MVAKILKNLA RAGILVSYRG
AKGGYGLARP ARQISVAEII TALEGPIAFT ECVEEGVDAC QYGDACTTSA NWWRISQVVQ
HALGSISLKD MSEPVVPLRM MAPRAGSLKG DAS
|
|---|
| |