Gene Mjls_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3930 
Symbol 
ID4879639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4150788 
End bp4151276 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID640141242 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001072196 
Protein GI126436505 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.162755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGT CGGCCAAGGC GGAGTATGCC GTCCGGGCCA TGGTGCAGCT GGCCACCGCC 
GACGACGGTG TGCTGGTCAA AACCGACGAC CTCGCGAAAG CCCAGGGGAT TCCGGCGCAG
TTCCTCGTCG ACATCCTCTC CGATCTGCGC ACCGACCGGC TGGTGCGCAG CCAGCGCGGC
CGCGACGGCG GTTACGAACT CGCCCGGCCG GCCGCCGACA TCAGCATCGC CGACGTCCTG
CGCTGCATCG ACGGCCCGTT GGCCAGCGTG CGCGACATCG GCCTCGGCGA CCTGCCGTAC
TCCGGCCCGA CCGCGGCGCT GACCGATGTG TGGCGCGCGC TGCGGGCCAG CATGCGTTCG
GTGCTCGAAC AGACCAGCCT CGCCGACGTG GCGTCCGGTG CGCTGCCTGC GCACGTGGCG
TCGATGGCCG GTGACTACCT CGACCAGGAG CGCAAACGCG GCCACCACCA CCGCGTGGAC
TCGAAATAG
 
Protein sequence
MRMSAKAEYA VRAMVQLATA DDGVLVKTDD LAKAQGIPAQ FLVDILSDLR TDRLVRSQRG 
RDGGYELARP AADISIADVL RCIDGPLASV RDIGLGDLPY SGPTAALTDV WRALRASMRS
VLEQTSLADV ASGALPAHVA SMAGDYLDQE RKRGHHHRVD SK