Gene Cphamn1_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0503 
Symbol 
ID6374167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp525798 
End bp526301 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content50% 
IMG OID642683020 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_001958947 
Protein GI189499477 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.715595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGA AAGTACTGAC CAAAAATACC GATTACGCCA TCAGGGCTCT TCTTGTGCTC 
GGAACGCACG AGGGAGAGTA TGTTTCTGCA CGACAGATTT CTCAGCAACA GGGTATTCCC
TACCAGTTTC TGAGAAGGAT ACTTCAGGAG CTCAACAAAA ATGGCCTTAC CACTTCAAGG
GAGGGCGCGC ATGGGGGCGT CAGGCTCGAA AAAAATCCTG ATGCAATCAG GGTCAGGGAT
GTTATCGAGA TTTTTCAGGG AAAGGTCGAG TTGTCCGAGT GCATGTTCCG CAAGCAGATC
TGTGCCAACC GCGCAAGCTG TGTGCTGCGT CATGAGATCA TGCGGATTGA AGAAATCGTC
AGCAGGGAGT TCGGGCAGAT CACTCTCGGC AAGCTGCTCA CTGATCTGAC CAAACTGAAC
GCGACGGCCA CGATGGACCA TACAGACGAA TTTGAAATCA TCAACTCAGG GAGCCATGAA
AAGACAGATT GTGACCATAG ATGA
 
Protein sequence
MLMKVLTKNT DYAIRALLVL GTHEGEYVSA RQISQQQGIP YQFLRRILQE LNKNGLTTSR 
EGAHGGVRLE KNPDAIRVRD VIEIFQGKVE LSECMFRKQI CANRASCVLR HEIMRIEEIV
SREFGQITLG KLLTDLTKLN ATATMDHTDE FEIINSGSHE KTDCDHR