Gene Oant_3617 details

Gene Information

• Locus tag: Oant_3617
• Symbol: rirA
• ID: 5381311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009668
• Strand: +
• Start bp: 993901
• End bp: 994362
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640836300
• Product: iron-responsive transcriptional regulator
• Protein accession: YP_001372152
• Protein GI: 153010938
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.973931
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTTA CCCGCCAGAC GAATTATGCC GTTCGTATGC TCATGTATTG TGCTGCCAAT 
GACGGCAAGC TCAGCCGCAT TCCGGAAATC GCACGCGCCT ACGGCGTTTC TGAGCTGTTT 
TTGTTCAAGA TTCTTCAGCC GCTCGTTGAA CATGGGCTGG TGGAAACTGT ACGTGGCCGC 
AATGGCGGCG TGCGCCTCGG ACGTGCAGCA CAGGACATTT CGCTGTTCGA TGTTGTGCGT 
GTGACCGAAG AAAACTTCGC CATGGCGGAG TGCTTCGAGA ACGATGCCAC CGAATGCCCA 
CTGGTCGACA GCTGCGCACT CAATTCAGCG CTGCGCGAGG CACTCAATGC ATTCTTCGCC 
GTGCTGATGA AGTACAGCAT TGCAGACCTC GTCAAGGCGC GCCCGAATGT GCGGCACCTG 
CTTGGTCTCG ATGAAATGGA AGAAGAGCGC GTAGCGAGCT GA 

 

Protein sequence

MRLTRQTNYA VRMLMYCAAN DGKLSRIPEI ARAYGVSELF LFKILQPLVE HGLVETVRGR 
NGGVRLGRAA QDISLFDVVR VTEENFAMAE CFENDATECP LVDSCALNSA LREALNAFFA 
VLMKYSIADL VKARPNVRHL LGLDEMEEER VAS