| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2760 |
|---|
| Symbol | |
|---|
| ID | 8334109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3169543 |
|---|
| End bp | 3169980 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644955908 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_003113514 |
|---|
| Protein GI | 256391950 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCT CGGCCAGAAC CGATTACGCC GTCCGCGTCC TGATCGAGCT CGCCGCGGCC
GATTCCCGGC CGGTGACCTG CGAGGCCATC GCCGAATCGC AGCAGATCCC GTACCGCTTC
CTGAAGGCGG TCGTCCGCGA TCTGCGCGTG GCCGGCCTGG TGCGCAGCCA GCGCGGCTGT
GAAGGCGGCT ACTGGATCGG CCGGGAAGCC GCCGAGATCG CGCTGGCCGA CGTCGTGCGC
GCGGTCGACG GCGAGTTGCT CACCGTGAAC GACGTGCCGC CGGCTGACGT CGCCTATCCC
GCACCGGCCG CCGGGCTGGG TCTGTTCTGG CTCGCCCTGG GTGCGCGCGT CGAGGACCTC
TTCGGCGCTG TCAGCATCGC CGACCTGCTG AACCAGACCG CTCACGCCGC GTTGGGCGCG
CCCGCCCTGC GGACGTGA
|
|---|
| Protein sequence | MRVSARTDYA VRVLIELAAA DSRPVTCEAI AESQQIPYRF LKAVVRDLRV AGLVRSQRGC
EGGYWIGREA AEIALADVVR AVDGELLTVN DVPPADVAYP APAAGLGLFW LALGARVEDL
FGAVSIADLL NQTAHAALGA PALRT
|
|---|
| |