Gene Swit_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2919 
Symbol 
ID5199287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand- 
Start bp3205499 
End bp3205903 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content74% 
IMG OID640582469 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001263409 
Protein GI148555827 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.71182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CCAGCCTGGC CGACTATGCG GTCGTCATGC TCTCCGCCGC CGCCCGCCAC 
GGCGCCGGCG AACGGCTGAC CGCGACGCTG CTGTCCGACG AGACCGGCGT GCCGCTGCCG 
ACCGCGCAGA AGCTGATGGG GCGGCTCGCC CAGGCCGGCC TGCTCGCCTC GGCGCGCGGC 
ACCGGCGGCG GCTTCCGCCT GGCGCGCGAT CCCGGCGCGA TCAGCCTCGC CGACATCGTC 
GAGGCGGTCG AGGGGCCGAT CGCCATGACC GCCTGCGTCG ACGACCATCG TCACGACTGC 
GGGCTGGAAA GCGCCTGCCG CGTCAAGCCG CATTGGGGTG TCGTCAACGA CACGATCCGC 
GGCGCGCTGG GCGGCGTGAG CCTCGCAACC CTGTCGAGAG CCTGA
 
Protein sequence
MRLSSLADYA VVMLSAAARH GAGERLTATL LSDETGVPLP TAQKLMGRLA QAGLLASARG 
TGGGFRLARD PGAISLADIV EAVEGPIAMT ACVDDHRHDC GLESACRVKP HWGVVNDTIR 
GALGGVSLAT LSRA