| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4268 |
|---|
| Symbol | |
|---|
| ID | 4013070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4500123 |
|---|
| End bp | 4500587 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637943920 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_551058 |
|---|
| Protein GI | 91790106 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.463591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGAC TGAGCAAGCT GACCGACTAC GGCACCGTGA TCATGACCCA CATGGCGCGG
CAGCCGGCTC ACGTCTACAG CGCCGCCGAG GTGGCTCTCG CGGTCAGCGT GACCGTCCCC
ACGGCGAGCA AGATCCTGAA AACGCTGGCA CGGGCAAACC TGCTGCAGTC GCTGCGCGGC
ACCCACGGGG GCTACCTGCT GTCGCGGCCG CCGGATGAGA TCTCCATCGC CGAGGTTGTC
GACGCGATGG AAGGGCCGGT CGGCGTGACC GAGTGCAGCG CCGCAGTTGG CCTGTGCGCG
CAGGAGGGCT CGTGTTCGCT GCGGGCCAAC TGGCAGCACG TCAACCAGGT CATTCGCAAC
GTGCTGAGCG ACCTCACGCT GGCGGACATG GCGCAACCGG TGTTTCGGCC GGTGAACGTC
GGCGCACTGC GGGCCCGGCG GCCACGCGAG GGCGTGAGGC AGTAG
|
|---|
| Protein sequence | MLRLSKLTDY GTVIMTHMAR QPAHVYSAAE VALAVSVTVP TASKILKTLA RANLLQSLRG
THGGYLLSRP PDEISIAEVV DAMEGPVGVT ECSAAVGLCA QEGSCSLRAN WQHVNQVIRN
VLSDLTLADM AQPVFRPVNV GALRARRPRE GVRQ
|
|---|
| |