| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0328 |
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| Symbol | rirA |
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| ID | 5321161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 358069 |
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| End bp | 358533 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789263 |
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| Product | iron-responsive transcriptional regulator |
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| Protein accession | YP_001326021 |
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| Protein GI | 150395554 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.069835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCTGA CGAAGCAAAC CAACTACGCA GTACGCATGT TGATGTACTG TGCTGCGAAC
GGCCAGAAGC TCAGCCGCAT TCCTGAGATC GCGCGGGCTT ACGGCGTTTC GGAGCTGTTC
CTTTTCAAAA TTCTGCAGCC GCTGACAAGA GCCGGCCTGG TCGAGACCGT GCGCGGCCGT
AACGGCGGCG TCCGCTTGCC GAGGCCGGCG GCGGAGATCA CCCTTTTCGA CGTCGTGAAG
GTGACGGAAG ACAGTTTCGC CATGGCGGAA TGCTTCGAGG CGGGCGAGAT CGACTGCCCG
CTGGTGGATA GCTGCGGCCT CAATGCCGCG CTGCGCAAGG CGCTGAACGC CTTTTTCGAA
GTGCTTCAGG GCTACACGAT CGACGACCTG GTCAAGGCAC GGCCGCAGAT CAACTTCCTG
CTCGGACTGG AAGAGCCCAC GCGGCCGCAG ACGTCGGCCG CCTGA
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| Protein sequence | MRLTKQTNYA VRMLMYCAAN GQKLSRIPEI ARAYGVSELF LFKILQPLTR AGLVETVRGR
NGGVRLPRPA AEITLFDVVK VTEDSFAMAE CFEAGEIDCP LVDSCGLNAA LRKALNAFFE
VLQGYTIDDL VKARPQINFL LGLEEPTRPQ TSAA
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