| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2078 |
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| Symbol | |
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| ID | 5456240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2263618 |
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| End bp | 2264064 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877655 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001413349 |
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| Protein GI | 154252525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000011336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000000000153974 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTATCGC AAAAAGCCAA ATACGCGCTG AAAGCCATGA TCGCACTGGC AACCCAGGAG
GAAGGTGACT TGCTTCAGGC GGCCGACATA GCGGAGCGGC AGAATGTGCC CCGGAAGTTC
CTCGAGCTGA TCCTGCTCGA TCTCCGGAAG CACGGTCTCG TCCGCAGCCA GCGCGGCAAG
TTCGGCGGCT ATGCACTGGC CAAACCGGCC GATGCGATCA CGTTTGGACA GGTTATTCGC
ATCATGGACG GGCCTTTGGC ACCCATCCCC TGTGCGAGCC TTACCGGCTA CCGGCGTTGT
GCCGACTGCC GGGACGAAAA ATCCTGCGCC GTCCGCCGGA CGATGCGGGA GGTACGCGAC
GCGGCGGCGG CGATCCTCGA CGGGACCACC ATCGCCGATG CGCTGGGTGC CGGCGCTCAT
GAAGCGAGGG CGGCAATCGG CGCTTAG
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| Protein sequence | MLSQKAKYAL KAMIALATQE EGDLLQAADI AERQNVPRKF LELILLDLRK HGLVRSQRGK
FGGYALAKPA DAITFGQVIR IMDGPLAPIP CASLTGYRRC ADCRDEKSCA VRRTMREVRD
AAAAILDGTT IADALGAGAH EARAAIGA
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