Gene Sfum_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1291 
Symbol 
ID4461127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1593152 
End bp1593553 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID639702060 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_845418 
Protein GI116748731 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.663964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGA CATGCCGCAG TGAGTACGCT CTGCTGGCGC TGGTTTACCT GGCGCGTCAC 
CAGGGCGAGA CATTCATCCC GGTGCCGGCC ATCGCGGCGG CTCAGGGCAT TCCCCCCAAG
TTCCTGGAAC AAATCCTGTT GTCGCTCCGG CTTGCCAAGT ACCTGCACAG TTCCAAGGGC
AAGAACGGAG GTTTTCGACT GGCCAAACCC GCGGACACGA TCACTCTTGC CGAGATCATC
CGGCTTTTCG ACGGCGCACT GGCCCCGACG GAGTCCGCGA GCAAGTATTT CTACGAACCC
ACGCCCATTG AGAAGGAAGG CAAGCTGCTG GCTCTTTTCA AGGAAGTGCG GGATTATCTT
TCGGACAAAA TGGAGCGCAC GACCATCGCC GACGTAGCAT AG
 
Protein sequence
MRLTCRSEYA LLALVYLARH QGETFIPVPA IAAAQGIPPK FLEQILLSLR LAKYLHSSKG 
KNGGFRLAKP ADTITLAEII RLFDGALAPT ESASKYFYEP TPIEKEGKLL ALFKEVRDYL
SDKMERTTIA DVA