Gene Caci_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0350 
Symbol 
ID8331677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp393416 
End bp393871 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content71% 
IMG OID644953517 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003111144 
Protein GI256389580 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.076588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATCT CAGCAAAAGC CGACTACGCG GTCCGGGTGA TGCTCGAGCT CGCGGCCCAC 
GGACCGAACC TGGTGAAGTC CACGGTCCTG ATCGACCACC AGGGTCTGCC CCGCAAGTTC
GTCGAATCGA TCCTGGTCGA ACTCCGCCGC GCCGACCTCA TCCGCAGCCA CCGCGGCGCC
GAAGGCGGCT ACACCCTGGC CCGGCCGGCC TCCGCGATCT CCATCGGCCA GGTCATCCGC
GCCGTGGACG GTCCGCTGGC CGAGGTCCGA GGCCTGCGCC CTCACGAGAC CGAGTACAGC
AACGCCGCGC AGCACCTCTC CGACGTCTGG GTCGCCGCCC GCGCGGCGCT GCGCAAGGTG
CTCGACGAGA CGAGCCTCGC GCACGTACTC AGCGGCAAGC TGCCGGCGCA CGTGCGGCGG
ATGGCGGAGT CGCCGGAGGC TTGGCTGCCT CGGTGA
 
Protein sequence
MQISAKADYA VRVMLELAAH GPNLVKSTVL IDHQGLPRKF VESILVELRR ADLIRSHRGA 
EGGYTLARPA SAISIGQVIR AVDGPLAEVR GLRPHETEYS NAAQHLSDVW VAARAALRKV
LDETSLAHVL SGKLPAHVRR MAESPEAWLP R