| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3024 |
|---|
| Symbol | |
|---|
| ID | 4581590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 200422 |
|---|
| End bp | 200859 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770350 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_916803 |
|---|
| Protein GI | 119385748 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTG CGACCTTTAC CGACTACGGA TTGCGGGTGC TGATGCGGCT GGCGGGGGCG
CCGGAAAAGC CGATCTCGAC CGGGCAGATC GCCAGGGAGT TCGCCATCTC GCAGCATCAC
CTGGCCAAGG TGGTCAGCGA CCTGGGGCTT GGCGGCTTCG TGCGGTCCGA GCGCGGCAGG
TCCGGCGGGC TGCGGCTGAT GCGCCCGGCG CACGAGATCA CGCTGGGACA GGTGGTGCGC
CATCTGGAGC GCAAGTTCGC CATCGTGGAA TGTTTCCGCG CCGATGGCGG CGAATGCGTC
CTGAGGCCGC GCTGCCGCCT GCGGCCGCAG CTTTCCGCCG CGCGCGAGGC GTTCATGGCC
GAGTTGGACC GTACGACGCT CGAGGATTGC GCCTGGCCCG GAGCGGGTCC GGGAGGGCGC
GTGGTGGCGG CCGAGTGA
|
|---|
| Protein sequence | MRLATFTDYG LRVLMRLAGA PEKPISTGQI AREFAISQHH LAKVVSDLGL GGFVRSERGR
SGGLRLMRPA HEITLGQVVR HLERKFAIVE CFRADGGECV LRPRCRLRPQ LSAAREAFMA
ELDRTTLEDC AWPGAGPGGR VVAAE
|
|---|
| |