117 homologs were found in PanDaTox collection
for query gene Synpcc7942_1171 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_1171  hypothetical protein  100 
 
 
503 aa  1045    Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4487  deoxyribodipyrimidine photolyase-related protein  56.2 
 
 
506 aa  614  9.999999999999999e-175  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_3982  deoxyribodipyrimidine photolyase-related protein  51.28 
 
 
507 aa  540  9.999999999999999e-153  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00134489 
 
 
-
 
NC_009523  RoseRS_0009  deoxyribodipyrimidine photolyase-related protein  44.8 
 
 
508 aa  432  1e-120  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0417103 
 
 
-
 
NC_009767  Rcas_4251  deoxyribodipyrimidine photolyase-related protein  45.38 
 
 
508 aa  433  1e-120  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2394  deoxyribodipyrimidine photolyase-related protein  42.91 
 
 
522 aa  417  9.999999999999999e-116  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1728  deoxyribodipyrimidine photolyase-related protein  43.98 
 
 
513 aa  413  1e-114  Acidiphilium cryptum JF-5  Bacteria  normal  0.483675  n/a   
 
 
-
 
NC_009439  Pmen_1204  deoxyribodipyrimidine photolyase-related protein  43.43 
 
 
520 aa  409  1e-113  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000923921  normal 
 
 
-
 
NC_006369  lpl0260  hypothetical protein  42.66 
 
 
512 aa  408  1.0000000000000001e-112  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_5626  deoxyribodipyrimidine photolyase-related protein  44.58 
 
 
534 aa  407  1.0000000000000001e-112  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.147008  normal  0.0556848 
 
 
-
 
NC_011138  MADE_02017  deoxyribodipyrimidine photolyase-related protein  40.99 
 
 
512 aa  408  1.0000000000000001e-112  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.571234  n/a   
 
 
-
 
NC_007492  Pfl01_2809  deoxyribodipyrimidine photolyase-like protein  42.34 
 
 
512 aa  403  1e-111  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3641  deoxyribodipyrimidine photolyase-related protein  41.67 
 
 
508 aa  405  1e-111  Jannaschia sp. CCS1  Bacteria  normal  normal  0.175337 
 
 
-
 
NC_008347  Mmar10_1000  deoxyribodipyrimidine photolyase-related protein  42.57 
 
 
511 aa  404  1e-111  Maricaulis maris MCS10  Bacteria  normal  0.760695  normal 
 
 
-
 
NC_011831  Cagg_3318  deoxyribodipyrimidine photolyase-related protein  43.78 
 
 
497 aa  400  9.999999999999999e-111  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.420687  hitchhiker  0.00000494763 
 
 
-
 
NC_004578  PSPTO_3689  hypothetical protein  41.04 
 
 
512 aa  395  1e-109  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.116484  n/a   
 
 
-
 
NC_008044  TM1040_2281  deoxyribodipyrimidine photolyase-related protein  40.43 
 
 
507 aa  398  1e-109  Ruegeria sp. TM1040  Bacteria  normal  normal  0.558867 
 
 
-
 
NC_013946  Mrub_2169  deoxyribodipyrimidine photolyase-related protein  45.03 
 
 
498 aa  395  1e-109  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal 
 
 
-
 
NC_008740  Maqu_3101  deoxyribodipyrimidine photolyase-related protein  41.3 
 
 
510 aa  394  1e-108  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2732  hypothetical protein  41.33 
 
 
508 aa  389  1e-107  Pseudomonas putida KT2440  Bacteria  normal  0.380402  normal 
 
 
-
 
NC_009512  Pput_3022  deoxyribodipyrimidine photolyase-related protein  41.13 
 
 
508 aa  389  1e-107  Pseudomonas putida F1  Bacteria  normal  0.619117  normal 
 
 
-
 
NC_010501  PputW619_2999  deoxyribodipyrimidine photolyase-related protein  41.22 
 
 
513 aa  390  1e-107  Pseudomonas putida W619  Bacteria  normal  normal  0.248063 
 
 
-
 
NC_010511  M446_5454  deoxyribodipyrimidine photolyase-related protein  43.98 
 
 
533 aa  390  1e-107  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.120235 
 
 
-
 
NC_013889  TK90_0821  deoxyribodipyrimidine photolyase-related protein  42.91 
 
 
525 aa  391  1e-107  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.627102  normal  0.414989 
 
 
-
 
NC_007005  Psyr_1785  deoxyribodipyrimidine photolyase-like protein protein  41.04 
 
 
519 aa  387  1e-106  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00721619 
 
 
-
 
NC_013422  Hneap_1235  deoxyribodipyrimidine photolyase-related protein  42.91 
 
 
511 aa  382  1e-105  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00923753  n/a   
 
 
-
 
NC_013202  Hmuk_2689  deoxyribodipyrimidine photolyase-related protein  40.67 
 
 
508 aa  384  1e-105  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.14747 
 
 
-
 
NC_007494  RSP_3077  hypothetical protein  40.92 
 
 
508 aa  379  1e-104  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3804  deoxyribodipyrimidine photolyase-related protein  41.12 
 
 
508 aa  380  1e-104  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.206805 
 
 
-
 
NC_013158  Huta_0265  deoxyribodipyrimidine photolyase-related protein  43.06 
 
 
510 aa  376  1e-103  Halorhabdus utahensis DSM 12940  Archaea  normal  0.319874  n/a   
 
 
-
 
NC_007963  Csal_0896  deoxyribodipyrimidine photolyase-related protein  40.85 
 
 
524 aa  371  1e-101  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1608  deoxyribodipyrimidine photolyase-related protein  41.99 
 
 
511 aa  372  1e-101  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_2012  deoxyribodipyrimidine photolyase-related protein  40.4 
 
 
502 aa  368  1e-100  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2956  hypothetical protein  39.36 
 
 
508 aa  362  9e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.888276  normal  0.195961 
 
 
-
 
NC_009952  Dshi_0599  deoxyribodipyrimidine photolyase-related protein  38.51 
 
 
508 aa  360  3e-98  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.315159  normal 
 
 
-
 
NC_010524  Lcho_1250  deoxyribodipyrimidine photolyase-related protein  41.72 
 
 
513 aa  355  8.999999999999999e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000733779 
 
 
-
 
NC_011901  Tgr7_1396  DNA photolyase  40.76 
 
 
524 aa  353  2.9999999999999997e-96  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.64137  n/a   
 
 
-
 
NC_014148  Plim_3755  deoxyribodipyrimidine photolyase-related protein  38.04 
 
 
532 aa  351  2e-95  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4518  deoxyribodipyrimidine photolyase-related protein  40.28 
 
 
533 aa  349  6e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3928  BCCT transporter  41.96 
 
 
508 aa  348  1e-94  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.240048  normal  0.840759 
 
 
-
 
NC_010087  Bmul_5845  deoxyribodipyrimidine photolyase-related protein  40.08 
 
 
509 aa  345  1e-93  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2055  putative alpha-deoxyribodipyrimidine photolyase-related protein  41.8 
 
 
510 aa  335  1e-90  Methylibium petroleiphilum PM1  Bacteria  normal  0.527245  normal 
 
 
-
 
NC_009338  Mflv_3490  deoxyribodipyrimidine photolyase-related protein  37.8 
 
 
505 aa  331  2e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.189609 
 
 
-
 
NC_010717  PXO_01727  deoxyribodipyrimidine photolyase-related protein  38.9 
 
 
525 aa  331  2e-89  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000795  DNA photolyase  37.03 
 
 
514 aa  328  2.0000000000000001e-88  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06692  hypothetical protein  36.24 
 
 
514 aa  328  2.0000000000000001e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_3270  deoxyribodipyrimidine photolyase-related protein  38.13 
 
 
494 aa  327  3e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.737297  normal 
 
 
-
 
NC_009665  Shew185_0441  deoxyribodipyrimidine photolyase-related protein  36.49 
 
 
525 aa  326  7e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1054  hypothetical protein  35.84 
 
 
521 aa  321  1.9999999999999998e-86  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.624164 
 
 
-
 
NC_013757  Gobs_0647  deoxyribodipyrimidine photolyase-related protein  38.31 
 
 
528 aa  320  3e-86  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0531  deoxyribodipyrimidine photolyase-related protein  39.5 
 
 
511 aa  320  5e-86  Thauera sp. MZ1T  Bacteria  normal  0.548466  n/a   
 
 
-
 
NC_008146  Mmcs_2924  deoxyribodipyrimidine photolyase-related protein  36.73 
 
 
525 aa  318  1e-85  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2968  deoxyribodipyrimidine photolyase-related protein  36.73 
 
 
525 aa  318  1e-85  Mycobacterium sp. KMS  Bacteria  normal  0.278599  normal 
 
 
-
 
NC_009077  Mjls_2939  deoxyribodipyrimidine photolyase-related protein  36.73 
 
 
496 aa  318  1e-85  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119687 
 
 
-
 
NC_014230  CA2559_07801  deoxyribodipyrimidine photolyase related protein  35 
 
 
511 aa  316  7e-85  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.179708  n/a   
 
 
-
 
NC_011663  Sbal223_0467  deoxyribodipyrimidine photolyase-related protein  36.29 
 
 
521 aa  316  8e-85  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0524  deoxyribodipyrimidine photolyase-related protein  36.54 
 
 
521 aa  315  9e-85  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0458  deoxyribodipyrimidine photolyase-related protein  36.49 
 
 
521 aa  314  2.9999999999999996e-84  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2791  deoxyribodipyrimidine photolyase-related protein  38.81 
 
 
500 aa  314  2.9999999999999996e-84  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000121396  hitchhiker  0.0000216403 
 
 
-
 
NC_009052  Sbal_3872  deoxyribodipyrimidine photolyase-related protein  36.29 
 
 
521 aa  312  1e-83  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0425  hypothetical protein  38.29 
 
 
516 aa  311  1e-83  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000280647  n/a   
 
 
-
 
NC_009664  Krad_3082  deoxyribodipyrimidine photolyase-related protein  37.12 
 
 
510 aa  310  2.9999999999999997e-83  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.47785  normal  0.0294382 
 
 
-
 
NC_008321  Shewmr4_3526  deoxyribodipyrimidine photolyase-related protein  36.8 
 
 
525 aa  310  5e-83  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4169  hypothetical protein  36.4 
 
 
521 aa  305  2.0000000000000002e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3704  deoxyribodipyrimidine photolyase-related protein  36.6 
 
 
525 aa  303  4.0000000000000003e-81  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0429  deoxyribodipyrimidine photolyase-related protein  36.58 
 
 
525 aa  302  8.000000000000001e-81  Shewanella sp. MR-7  Bacteria  normal  0.50429  normal 
 
 
-
 
NC_008345  Sfri_0777  deoxyribodipyrimidine photolyase-related protein  35.66 
 
 
528 aa  299  7e-80  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1551  deoxyribodipyrimidine photolyase-related protein  35.18 
 
 
516 aa  296  5e-79  Psychromonas ingrahamii 37  Bacteria  normal  0.585368  normal  0.610204 
 
 
-
 
NC_009654  Mmwyl1_0335  deoxyribodipyrimidine photolyase-related protein  35.06 
 
 
522 aa  296  9e-79  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_7174  deoxyribodipyrimidine photolyase-related protein  34.6 
 
 
492 aa  287  2.9999999999999996e-76  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2497  hypothetical protein  32.97 
 
 
569 aa  283  4.0000000000000003e-75  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3929  deoxyribodipyrimidine photolyase-related protein  35.16 
 
 
531 aa  283  5.000000000000001e-75  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I1806  hypothetical protein  34.98 
 
 
523 aa  275  1.0000000000000001e-72  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.501424  n/a   
 
 
-
 
NC_007335  PMN2A_0726  hypothetical protein  31.33 
 
 
496 aa  261  3e-68  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1117  photolyase family protein  33.66 
 
 
505 aa  260  4e-68  Synechococcus sp. CC9902  Bacteria  normal  0.322412  n/a   
 
 
-
 
NC_007516  Syncc9605_1361  photolyase family protein  33.33 
 
 
498 aa  254  2.0000000000000002e-66  Synechococcus sp. CC9605  Bacteria  normal  0.174089  normal  0.307121 
 
 
-
 
NC_008819  NATL1_15641  hypothetical protein  31.02 
 
 
496 aa  254  4.0000000000000004e-66  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.681049 
 
 
-
 
NC_007577  PMT9312_0423  hypothetical protein  31.25 
 
 
496 aa  248  1e-64  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.27403  n/a   
 
 
-
 
NC_008312  Tery_3925  deoxyribodipyrimidine photolyase-related protein  32.87 
 
 
476 aa  248  1e-64  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.0027073 
 
 
-
 
NC_008816  A9601_04781  hypothetical protein  30.94 
 
 
496 aa  246  6.999999999999999e-64  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.289419  n/a   
 
 
-
 
NC_013223  Dret_1823  deoxyribodipyrimidine photolyase-related protein  32.25 
 
 
502 aa  246  9e-64  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0760009  normal 
 
 
-
 
NC_009091  P9301_04471  hypothetical protein  29.82 
 
 
496 aa  239  5.999999999999999e-62  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.77539  n/a   
 
 
-
 
NC_008817  P9515_04871  hypothetical protein  30.27 
 
 
496 aa  239  8e-62  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2030  deoxyribodipyrimidine photolyase-related protein  32.4 
 
 
519 aa  239  1e-61  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0662893  normal  0.30492 
 
 
-
 
NC_008228  Patl_2797  deoxyribodipyrimidine photolyase-related protein  30.79 
 
 
503 aa  238  2e-61  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2542  deoxyribodipyrimidine photolyase-related protein  30.37 
 
 
537 aa  215  1.9999999999999998e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000228868 
 
 
-
 
NC_013521  Sked_26230  deoxyribodipyrimidine photolyase-related protein  29.06 
 
 
532 aa  198  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.355559  normal  0.113738 
 
 
-
 
NC_010531  Pnec_1265  deoxyribodipyrimidine photolyase-like protein  41.67 
 
 
186 aa  120  3.9999999999999996e-26  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.224709 
 
 
-
 
NC_010338  Caul_2919  deoxyribodipyrimidine photo-lyase  28.27 
 
 
478 aa  58.5  0.0000002  Caulobacter sp. K31  Bacteria  normal  normal  0.219923 
 
 
-
 
NC_010717  PXO_04795  photolyase  25.94 
 
 
472 aa  55.8  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.722935  n/a   
 
 
-
 
NC_011071  Smal_1562  Deoxyribodipyrimidine photo-lyase  26.07 
 
 
471 aa  55.8  0.000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.51951  normal  0.490223 
 
 
-
 
NC_010086  Bmul_4692  deoxyribodipyrimidine photo-lyase  24.92 
 
 
476 aa  54.7  0.000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3165  deoxyribodipyrimidine photolyase family protein  27.43 
 
 
476 aa  54.7  0.000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2075  deoxyribodipyrimidine photolyase family protein  26.44 
 
 
476 aa  54.7  0.000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS2956  deoxyribodipyrimidine photolyase family protein  24.47 
 
 
476 aa  53.9  0.000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.13805  n/a   
 
 
-
 
NC_007530  GBAA_3180  deoxyribodipyrimidine photolyase family protein  24.47 
 
 
469 aa  53.9  0.000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.478094  n/a   
 
 
-
 
NC_005957  BT9727_2935  deoxyribodipyrimidine photolyase  24.17 
 
 
476 aa  52.4  0.00002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0271  hypothetical protein  28.57 
 
 
471 aa  52  0.00002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0266  hypothetical protein  28.57 
 
 
471 aa  52  0.00002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_3187  deoxyribodipyrimidine photolyase family protein  24.17 
 
 
476 aa  52.4  0.00002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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