| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1265 |
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| Symbol | |
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| ID | 6183616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1098054 |
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| End bp | 1098614 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671835 |
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| Product | deoxyribodipyrimidine photolyase-like protein |
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| Protein accession | YP_001798008 |
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| Protein GI | 171463895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.224709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGACGG GAAATTTTGC GTTATTGGCA GAAATTCTGC CGCAGGAAGC ATGTGAATGG
TATTTGGCCA TTTATGTGGA TGCAATCGAA TGGGTTGAGT TACCCAATAC GGCCGGCATG
GCTTTATTTG CCAATGGCGG CAGGTTTACT AGTAAGCCTT ATATAGCCAG CGGGGCATAC
ATCAAGCGCA TGAGTAATTA TTGCGGTTCA TGTAAATATC AGCCTGAAGT TCGTTATGGA
GAAGAAGCTT GCCCCATTAC GACTTTGTAT TGGAATTTCT TGATCAAGCA TCGTGATCAG
TTTGAGGCTA GTCTTCTTGG ATTTGGGGTA TTGGTCCGTA TGCTGTATCG CCGTCAGGCA
ATAGTGGCAA GTTTGGTTCG CAACAAACCG GCGCAGGCGT ACAGCTGTTG TACTCAATCG
CCATGGAGCT TGGACTTATG GCTTGCTCGG CTATCAATCT TGGAGTGTCG GAGGCAATCC
AACTTTTGGT ACGCAAAACA ACCTATATGG TCAGCCGTTT GTAGCCTACA CAACCAAGGA
TGCATGGATA TTTACAACTA A
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| Protein sequence | MVTGNFALLA EILPQEACEW YLAIYVDAIE WVELPNTAGM ALFANGGRFT SKPYIASGAY
IKRMSNYCGS CKYQPEVRYG EEACPITTLY WNFLIKHRDQ FEASLLGFGV LVRMLYRRQA
IVASLVRNKP AQAYSCCTQS PWSLDLWLAR LSILECRRQS NFWYAKQPIW SAVCSLHNQG
CMDIYN
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