88 homologs were found in PanDaTox collection
for query gene Pnec_1265 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010531  Pnec_1265  deoxyribodipyrimidine photolyase-like protein  100 
 
 		 186 aa  388  1e-107  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.224709 
 
 
-
 
NC_009379  Pnuc_1608  deoxyribodipyrimidine photolyase-related protein  90.38 
 
 		 511 aa  205  3e-52  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0425  hypothetical protein  63.37 
 
 		 516 aa  149  2e-35  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000280647  n/a   
 
 
-
 
NC_004347  SO_4169  hypothetical protein  54.89 
 
 		 521 aa  149  3e-35  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1396  DNA photolyase  64.36 
 
 		 524 aa  148  6e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.64137  n/a   
 
 
-
 
NC_008322  Shewmr7_0429  deoxyribodipyrimidine photolyase-related protein  54.89 
 
 		 525 aa  146  1.0000000000000001e-34  Shewanella sp. MR-7  Bacteria  normal  0.50429  normal  1 
 
 
-
 
NC_008321  Shewmr4_3526  deoxyribodipyrimidine photolyase-related protein  54.89 
 
 		 525 aa  147  1.0000000000000001e-34  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_2281  deoxyribodipyrimidine photolyase-related protein  62.5 
 
 		 507 aa  147  1.0000000000000001e-34  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.558867 
 
 
-
 
NC_008577  Shewana3_3704  deoxyribodipyrimidine photolyase-related protein  54.89 
 
 		 525 aa  145  3e-34  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006369  lpl0260  hypothetical protein  50 
 
 		 512 aa  144  6e-34  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0335  deoxyribodipyrimidine photolyase-related protein  58.42 
 
 		 522 aa  142  2e-33  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013422  Hneap_1235  deoxyribodipyrimidine photolyase-related protein  48.94 
 
 		 511 aa  143  2e-33  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00923753  n/a   
 
 
-
 
NC_009952  Dshi_0599  deoxyribodipyrimidine photolyase-related protein  59.62 
 
 		 508 aa  142  2e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.315159  normal  1 
 
 
-
 
NC_002947  PP_2732  hypothetical protein  61.54 
 
 		 508 aa  142  3e-33  Pseudomonas putida KT2440  Bacteria  normal  0.380402  normal  1 
 
 
-
 
NC_010524  Lcho_1250  deoxyribodipyrimidine photolyase-related protein  59.81 
 
 		 513 aa  142  3e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000733779 
 
 
-
 
NC_009512  Pput_3022  deoxyribodipyrimidine photolyase-related protein  61.54 
 
 		 508 aa  142  3e-33  Pseudomonas putida F1  Bacteria  normal  0.619117  normal  1 
 
 
-
 
NC_004578  PSPTO_3689  hypothetical protein  61.39 
 
 		 512 aa  141  4e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.116484  n/a   
 
 
-
 
NC_007963  Csal_0896  deoxyribodipyrimidine photolyase-related protein  53.6 
 
 		 524 aa  141  5e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3928  BCCT transporter  59.8 
 
 		 508 aa  141  6e-33  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.240048  normal  0.840759 
 
 
-
 
NC_009784  VIBHAR_06692  hypothetical protein  53.49 
 
 		 514 aa  140  9.999999999999999e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000795  DNA photolyase  53.49 
 
 		 514 aa  140  9.999999999999999e-33  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_2999  deoxyribodipyrimidine photolyase-related protein  61.62 
 
 		 513 aa  139  1.9999999999999998e-32  Pseudomonas putida W619  Bacteria  normal  1  normal  0.248063 
 
 
-
 
NC_007005  Psyr_1785  deoxyribodipyrimidine photolyase-like protein protein  62.63 
 
 		 519 aa  139  1.9999999999999998e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  hitchhiker  0.00721619 
 
 
-
 
NC_009439  Pmen_1204  deoxyribodipyrimidine photolyase-related protein  56.41 
 
 		 520 aa  139  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000923921  normal  1 
 
 
-
 
NC_008825  Mpe_A2055  putative alpha-deoxyribodipyrimidine photolyase-related protein  58.59 
 
 		 510 aa  138  3.9999999999999997e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.527245  normal  1 
 
 
-
 
NC_013889  TK90_0821  deoxyribodipyrimidine photolyase-related protein  58.42 
 
 		 525 aa  137  1e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.627102  normal  0.414989 
 
 
-
 
NC_007494  RSP_3077  hypothetical protein  59.8 
 
 		 508 aa  137  1e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3804  deoxyribodipyrimidine photolyase-related protein  59.8 
 
 		 508 aa  137  1e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.206805 
 
 
-
 
NC_008740  Maqu_3101  deoxyribodipyrimidine photolyase-related protein  56.44 
 
 		 510 aa  137  1e-31  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_1728  deoxyribodipyrimidine photolyase-related protein  59.62 
 
 		 513 aa  135  2e-31  Acidiphilium cryptum JF-5  Bacteria  normal  0.483675  n/a   
 
 
-
 
NC_009438  Sputcn32_0524  deoxyribodipyrimidine photolyase-related protein  51.56 
 
 		 521 aa  135  3.0000000000000003e-31  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3872  deoxyribodipyrimidine photolyase-related protein  60.2 
 
 		 521 aa  135  3.0000000000000003e-31  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0458  deoxyribodipyrimidine photolyase-related protein  60.2 
 
 		 521 aa  135  3.0000000000000003e-31  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_0467  deoxyribodipyrimidine photolyase-related protein  60.2 
 
 		 521 aa  135  3.0000000000000003e-31  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0441  deoxyribodipyrimidine photolyase-related protein  49.64 
 
 		 525 aa  135  3.0000000000000003e-31  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3641  deoxyribodipyrimidine photolyase-related protein  57.43 
 
 		 508 aa  134  6.0000000000000005e-31  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.175337 
 
 
-
 
NC_008700  Sama_2497  hypothetical protein  55.77 
 
 		 569 aa  134  7.000000000000001e-31  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1551  deoxyribodipyrimidine photolyase-related protein  53.85 
 
 		 516 aa  134  8e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.585368  normal  0.610204 
 
 
-
 
NC_011138  MADE_02017  deoxyribodipyrimidine photolyase-related protein  55.45 
 
 		 512 aa  134  8e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.571234  n/a   
 
 
-
 
NC_007492  Pfl01_2809  deoxyribodipyrimidine photolyase-like protein  54.7 
 
 		 512 aa  134  8e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_01727  deoxyribodipyrimidine photolyase-related protein  52.54 
 
 		 525 aa  133  9.999999999999999e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0777  deoxyribodipyrimidine photolyase-related protein  55.88 
 
 		 528 aa  134  9.999999999999999e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4518  deoxyribodipyrimidine photolyase-related protein  57.58 
 
 		 533 aa  132  1.9999999999999998e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_5626  deoxyribodipyrimidine photolyase-related protein  59.41 
 
 		 534 aa  132  1.9999999999999998e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.147008  normal  0.0556848 
 
 
-
 
NC_007794  Saro_2394  deoxyribodipyrimidine photolyase-related protein  53.98 
 
 		 522 aa  132  3.9999999999999996e-30  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_5454  deoxyribodipyrimidine photolyase-related protein  51.15 
 
 		 533 aa  130  1.0000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.120235 
 
 
-
 
NC_010087  Bmul_5845  deoxyribodipyrimidine photolyase-related protein  47.24 
 
 		 509 aa  130  2.0000000000000002e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0009  deoxyribodipyrimidine photolyase-related protein  55.36 
 
 		 508 aa  128  4.0000000000000003e-29  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0417103 
 
 
-
 
NC_008347  Mmar10_1000  deoxyribodipyrimidine photolyase-related protein  51.92 
 
 		 511 aa  128  5.0000000000000004e-29  Maricaulis maris MCS10  Bacteria  normal  0.760695  normal  1 
 
 
-
 
NC_010506  Swoo_3929  deoxyribodipyrimidine photolyase-related protein  50.96 
 
 		 531 aa  127  7.000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4251  deoxyribodipyrimidine photolyase-related protein  53.57 
 
 		 508 aa  127  8.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2791  deoxyribodipyrimidine photolyase-related protein  53.85 
 
 		 500 aa  126  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000121396  hitchhiker  0.0000216403 
 
 
-
 
NC_011312  VSAL_I1806  hypothetical protein  55.45 
 
 		 523 aa  126  2.0000000000000002e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.501424  n/a   
 
 
-
 
NC_011831  Cagg_3318  deoxyribodipyrimidine photolyase-related protein  54.46 
 
 		 497 aa  125  4.0000000000000003e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.420687  hitchhiker  0.00000494763 
 
 
-
 
NC_008255  CHU_1054  hypothetical protein  54.08 
 
 		 521 aa  125  4.0000000000000003e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.624164 
 
 
-
 
NC_014148  Plim_3755  deoxyribodipyrimidine photolyase-related protein  50 
 
 		 532 aa  124  5e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_07801  deoxyribodipyrimidine photolyase related protein  43.18 
 
 		 511 aa  124  7e-28  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.179708  n/a   
 
 
-
 
NC_011662  Tmz1t_0531  deoxyribodipyrimidine photolyase-related protein  51.92 
 
 		 511 aa  124  1e-27  Thauera sp. MZ1T  Bacteria  normal  0.548466  n/a   
 
 
-
 
NC_007604  Synpcc7942_1171  hypothetical protein  41.67 
 
 		 503 aa  120  8e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_4487  deoxyribodipyrimidine photolyase-related protein  50 
 
 		 506 aa  119  1.9999999999999998e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_2956  hypothetical protein  49.5 
 
 		 508 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.888276  normal  0.195961 
 
 
-
 
NC_009664  Krad_3082  deoxyribodipyrimidine photolyase-related protein  47.12 
 
 		 510 aa  118  4.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.47785  normal  0.0294382 
 
 
-
 
NC_013124  Afer_2012  deoxyribodipyrimidine photolyase-related protein  49.5 
 
 		 502 aa  118  4.9999999999999996e-26  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_2924  deoxyribodipyrimidine photolyase-related protein  45.71 
 
 		 525 aa  114  6e-25  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_2968  deoxyribodipyrimidine photolyase-related protein  45.71 
 
 		 525 aa  114  6e-25  Mycobacterium sp. KMS  Bacteria  normal  0.278599  normal  1 
 
 
-
 
NC_009077  Mjls_2939  deoxyribodipyrimidine photolyase-related protein  45.71 
 
 		 496 aa  114  6.9999999999999995e-25  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.119687 
 
 
-
 
NC_013757  Gobs_0647  deoxyribodipyrimidine photolyase-related protein  47.52 
 
 		 528 aa  111  6e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3982  deoxyribodipyrimidine photolyase-related protein  45.19 
 
 		 507 aa  110  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  1  hitchhiker  0.00134489 
 
 
-
 
NC_009338  Mflv_3490  deoxyribodipyrimidine photolyase-related protein  43.81 
 
 		 505 aa  110  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.189609 
 
 
-
 
NC_008726  Mvan_3270  deoxyribodipyrimidine photolyase-related protein  41.9 
 
 		 494 aa  106  2e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.737297  normal  1 
 
 
-
 
NC_013946  Mrub_2169  deoxyribodipyrimidine photolyase-related protein  41.09 
 
 		 498 aa  104  6e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal  1 
 
 
-
 
NC_013158  Huta_0265  deoxyribodipyrimidine photolyase-related protein  43.27 
 
 		 510 aa  98.6  4e-20  Halorhabdus utahensis DSM 12940  Archaea  normal  0.319874  n/a   
 
 
-
 
NC_013202  Hmuk_2689  deoxyribodipyrimidine photolyase-related protein  41.35 
 
 		 508 aa  96.7  2e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.14747 
 
 
-
 
NC_013132  Cpin_7174  deoxyribodipyrimidine photolyase-related protein  40.52 
 
 		 492 aa  92.8  3e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007335  PMN2A_0726  hypothetical protein  29.85 
 
 		 496 aa  83.6  0.000000000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008819  NATL1_15641  hypothetical protein  29.85 
 
 		 496 aa  83.6  0.000000000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.681049 
 
 
-
 
NC_008312  Tery_3925  deoxyribodipyrimidine photolyase-related protein  51.43 
 
 		 476 aa  82.4  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  1  hitchhiker  0.0027073 
 
 
-
 
NC_008816  A9601_04781  hypothetical protein  34.11 
 
 		 496 aa  82.8  0.000000000000003  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.289419  n/a   
 
 
-
 
NC_013223  Dret_1823  deoxyribodipyrimidine photolyase-related protein  39.42 
 
 		 502 aa  82.8  0.000000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0760009  normal  1 
 
 
-
 
NC_007577  PMT9312_0423  hypothetical protein  34.88 
 
 		 496 aa  82.4  0.000000000000003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.27403  n/a   
 
 
-
 
NC_009091  P9301_04471  hypothetical protein  35.66 
 
 		 496 aa  82  0.000000000000005  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.77539  n/a   
 
 
-
 
NC_008817  P9515_04871  hypothetical protein  44.78 
 
 		 496 aa  81.3  0.000000000000007  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_1361  photolyase family protein  33.59 
 
 		 498 aa  81.3  0.000000000000008  Synechococcus sp. CC9605  Bacteria  normal  0.174089  normal  0.307121 
 
 
-
 
NC_013440  Hoch_2030  deoxyribodipyrimidine photolyase-related protein  39.81 
 
 		 519 aa  79.7  0.00000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0662893  normal  0.30492 
 
 
-
 
NC_013521  Sked_26230  deoxyribodipyrimidine photolyase-related protein  36.54 
 
 		 532 aa  77  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.355559  normal  0.113738 
 
 
-
 
NC_011886  Achl_2542  deoxyribodipyrimidine photolyase-related protein  36.27 
 
 		 537 aa  75.1  0.0000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000228868 
 
 
-
 
NC_007513  Syncc9902_1117  photolyase family protein  34.75 
 
 		 505 aa  73.6  0.000000000002  Synechococcus sp. CC9902  Bacteria  normal  0.322412  n/a   
 
 
-
 
NC_008228  Patl_2797  deoxyribodipyrimidine photolyase-related protein  30.77 
 
 		 503 aa  64.7  0.0000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
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